HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:112.4 nTPM
HPA:112.4 nTPM
GTEx:87.5 nTPM
FANTOM5:237.7 Scaled Tags Per Million
Pig:61.1 nTPM
Mouse:141.3 nTPM
Allen mouse:17.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065424
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 112.4
Sample id Sample description nTPM
Hippocampus
nTPM: 108.1
2529 Female, age 94, left hemisphere 122.9
1855 Male, age 76, left hemisphere 118.9
1898 Male, age 80, left hemisphere 117.7
2148 Female, age 91, left hemisphere 100.7
2621 Female, age 67, right hemisphere 100.0
1911 Female, age 85, right hemisphere 88.1
Dentate gyrus
nTPM: 107.7
2530 Female, age 94, left hemisphere 138.5
2010 Male, age 76, both hemispheres 128.3
2528 Male, age 74, both hemispheres 103.6
1927 Female, age 91, both hemispheres 95.3
2246 Female, age 85, both hemispheres 93.7
2531 Female, age 67, both hemispheres 86.6
Entorhinal gyrus
nTPM: 97.3
1787 Male, age 76, left hemisphere 103.7
2613 Female, age 94, left hemisphere 101.6
2764 Male, age 80, right hemisphere 101.1
1938 Female, age 85, left hemisphere 97.6
2117 Female, age 91, right hemisphere 94.5
2686 Male, age 75, right hemisphere 85.3
Hippocampus, CA1
nTPM: 112.4
2749 Male, age 80, left hemisphere 153.3
1873 Female, age 85, both hemispheres 112.6
2045 Male, age 76, both hemispheres 108.6
2527 Male, age 74, both hemispheres 95.6
2082 Female, age 91, right hemisphere 91.7
Hippocampus, CA2
nTPM: 106.3
1892 Male, age 76, both hemispheres 119.5
2437 Female, age 94, left hemisphere 117.8
1963 Male, age 80, left hemisphere 116.0
2249 Male, age 74, both hemispheres 104.7
2113 Female, age 91, right hemisphere 91.2
1940 Female, age 85, left hemisphere 88.4
Hippocampus, CA3
nTPM: 111.9
2436 Male, age 74, both hemispheres 135.7
2137 Male, age 80, left hemisphere 134.9
1867 Male, age 76, both hemispheres 112.7
2620 Female, age 94, left hemisphere 98.5
2861 Female, age 67, both hemispheres 98.5
1891 Female, age 85, both hemispheres 91.4
Parahippocampal cortex
nTPM: 90.9
1850 Male, age 80, both hemispheres 106.4
2018 Male, age 76, both hemispheres 96.1
1990 Female, age 91, right hemisphere 96.0
1933 Female, age 85, both hemispheres 94.2
2245 Female, age 91, both hemispheres 92.8
2622 Female, age 67, right hemisphere 90.6
2532 Female, age 72, left hemisphere 89.5
2692 Male, age 74, both hemispheres 88.7
2250 Female, age 67, right hemisphere 79.4
2693 Female, age 94, both hemispheres 75.0
Perirhinal gyrus
nTPM: 94.5
1794 Male, age 80, right hemisphere 108.4
1847 Female, age 91, left hemisphere 99.9
1841 Female, age 85, right hemisphere 89.2
2848 Male, age 76, right hemisphere 88.4
2521 Female, age 94, right hemisphere 86.7
Subiculum
nTPM: 103.1
2438 Female, age 94, left hemisphere 113.0
1901 Male, age 80, both hemispheres 112.5
2042 Male, age 76, both hemispheres 109.4
2619 Male, age 74, both hemispheres 100.3
2729 Female, age 91, right hemisphere 92.8
1977 Female, age 85, both hemispheres 90.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.5
Samples: 197

Max nTPM: 141.8
Min nTPM: 60.9
Std nTPM: 15.4
Median nTPM: 86.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 141.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 129.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 128.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 125.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 124.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 123.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 123.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 122.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 119.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 116.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 115.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 237.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 237.7
FF:10169-103B7 60 years, female 283.5
FF:10153-102I9 76 years, female 191.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 57.8
Samples: 4

Max nTPM: 72.8
Min nTPM: 39.2
Sample A Female 72.8
Sample B Female 59.8
Sample C Male 59.4
Sample D Male 39.2
Entorhinal cortex
nTPM: 58.8
Samples: 4

Max nTPM: 66.0
Min nTPM: 51.1
Sample A Female 66.0
Sample B Female 56.0
Sample C Male 62.0
Sample D Male 51.1
Subiculum
nTPM: 60.6
Samples: 4

Max nTPM: 76.6
Min nTPM: 50.9
Sample A Female 76.6
Sample B Female 50.9
Sample C Male 60.8
Sample D Male 54.1
Ventral hippocampus
nTPM: 61.1
Samples: 4

Max nTPM: 81.1
Min nTPM: 41.9
Sample A Female 61.9
Sample B Female 41.9
Sample C Male 81.1
Sample D Male 59.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 141.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 141.3
Samples: 4

Max nTPM: 161.2
Min nTPM: 126.3
Sample A Male 138.6
Sample B Male 139.1
Sample C Female 126.3
Sample D Female 161.2
Hippocampal formation
nTPM: 118.4
Samples: 4

Max nTPM: 127.7
Min nTPM: 105.1
Sample A Male 105.1
Sample B Male 123.8
Sample C Female 127.7
Sample D Female 117.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.0
68924787 Antisense, RP_050309_01_A05, Mouse strain C57BL/6J (56 days, male) 17.0

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