HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.9 nTPM
HPA:20.9 nTPM
GTEx:38.8 nTPM
FANTOM5:88.1 Scaled Tags Per Million
Pig:49.2 nTPM
Mouse:25.9 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036462
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.9
Sample id Sample description nTPM
Hippocampus
nTPM: 19.1
2529 Female, age 94, left hemisphere 21.5
1911 Female, age 85, right hemisphere 20.2
1855 Male, age 76, left hemisphere 18.7
2621 Female, age 67, right hemisphere 18.7
1898 Male, age 80, left hemisphere 18.1
2148 Female, age 91, left hemisphere 17.2
Dentate gyrus
nTPM: 19.4
2010 Male, age 76, both hemispheres 23.3
2530 Female, age 94, left hemisphere 20.9
2531 Female, age 67, both hemispheres 18.4
2246 Female, age 85, both hemispheres 18.2
1927 Female, age 91, both hemispheres 18.1
2528 Male, age 74, both hemispheres 17.4
Entorhinal gyrus
nTPM: 19.9
2686 Male, age 75, right hemisphere 24.4
2117 Female, age 91, right hemisphere 22.1
1938 Female, age 85, left hemisphere 18.8
1787 Male, age 76, left hemisphere 18.7
2764 Male, age 80, right hemisphere 18.0
2613 Female, age 94, left hemisphere 17.3
Hippocampus, CA1
nTPM: 18.7
2045 Male, age 76, both hemispheres 22.3
2527 Male, age 74, both hemispheres 18.5
2082 Female, age 91, right hemisphere 18.4
1873 Female, age 85, both hemispheres 18.1
2749 Male, age 80, left hemisphere 16.4
Hippocampus, CA2
nTPM: 18.7
1892 Male, age 76, both hemispheres 20.9
2113 Female, age 91, right hemisphere 18.8
2437 Female, age 94, left hemisphere 18.6
1940 Female, age 85, left hemisphere 18.5
1963 Male, age 80, left hemisphere 17.9
2249 Male, age 74, both hemispheres 17.7
Hippocampus, CA3
nTPM: 18.1
1891 Female, age 85, both hemispheres 20.9
1867 Male, age 76, both hemispheres 20.3
2861 Female, age 67, both hemispheres 17.5
2620 Female, age 94, left hemisphere 17.4
2137 Male, age 80, left hemisphere 16.8
2436 Male, age 74, both hemispheres 15.4
Parahippocampal cortex
nTPM: 19.4
2018 Male, age 76, both hemispheres 23.7
2692 Male, age 74, both hemispheres 21.0
1850 Male, age 80, both hemispheres 19.8
1933 Female, age 85, both hemispheres 19.7
2532 Female, age 72, left hemisphere 19.2
2245 Female, age 91, both hemispheres 19.1
1990 Female, age 91, right hemisphere 18.2
2622 Female, age 67, right hemisphere 18.1
2693 Female, age 94, both hemispheres 17.8
2250 Female, age 67, right hemisphere 17.2
Perirhinal gyrus
nTPM: 18.8
1841 Female, age 85, right hemisphere 21.0
2848 Male, age 76, right hemisphere 20.6
1794 Male, age 80, right hemisphere 18.0
1847 Female, age 91, left hemisphere 17.7
2521 Female, age 94, right hemisphere 16.7
Subiculum
nTPM: 20.9
2042 Male, age 76, both hemispheres 24.4
1901 Male, age 80, both hemispheres 22.0
2438 Female, age 94, left hemisphere 21.7
2619 Male, age 74, both hemispheres 19.3
1977 Female, age 85, both hemispheres 19.0
2729 Female, age 91, right hemisphere 19.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.8
Samples: 197

Max nTPM: 86.1
Min nTPM: 20.5
Std nTPM: 10.8
Median nTPM: 36.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 86.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 80.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 72.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 71.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 67.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 66.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 65.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 63.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 62.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 62.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 61.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.1
FF:10153-102I9 76 years, female 105.1
FF:10169-103B7 60 years, female 71.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.2
Samples: 4

Max nTPM: 53.2
Min nTPM: 44.0
Sample A Female 53.1
Sample B Female 46.5
Sample C Male 53.2
Sample D Male 44.0
Entorhinal cortex
nTPM: 38.5
Samples: 4

Max nTPM: 40.5
Min nTPM: 37.1
Sample A Female 37.6
Sample B Female 40.5
Sample C Male 38.6
Sample D Male 37.1
Subiculum
nTPM: 42.6
Samples: 4

Max nTPM: 47.1
Min nTPM: 40.2
Sample A Female 47.1
Sample B Female 41.7
Sample C Male 40.2
Sample D Male 41.2
Ventral hippocampus
nTPM: 43.8
Samples: 4

Max nTPM: 49.5
Min nTPM: 40.5
Sample A Female 43.8
Sample B Female 40.5
Sample C Male 41.3
Sample D Male 49.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.0
Samples: 4

Max nTPM: 27.1
Min nTPM: 24.6
Sample A Male 24.6
Sample B Male 25.3
Sample C Female 26.8
Sample D Female 27.1
Hippocampal formation
nTPM: 24.1
Samples: 4

Max nTPM: 25.6
Min nTPM: 22.9
Sample A Male 22.9
Sample B Male 25.6
Sample C Female 25.0
Sample D Female 22.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
69262335 Antisense, RP_050303_02_B05, Mouse strain C57BL/6J (56 days, male) 3.5

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