HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:131.0 nTPM
HPA:131.0 nTPM
GTEx:121.1 nTPM
FANTOM5:374.8 Scaled Tags Per Million
Pig:132.4 nTPM
Mouse:315.6 nTPM
Allen mouse:17.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039319
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 131.0
Sample id Sample description nTPM
Hippocampus
nTPM: 111.3
1898 Male, age 80, left hemisphere 129.3
1855 Male, age 76, left hemisphere 116.1
2621 Female, age 67, right hemisphere 109.1
2529 Female, age 94, left hemisphere 107.6
2148 Female, age 91, left hemisphere 105.8
1911 Female, age 85, right hemisphere 99.8
Dentate gyrus
nTPM: 108.2
2010 Male, age 76, both hemispheres 114.3
1927 Female, age 91, both hemispheres 109.8
2530 Female, age 94, left hemisphere 107.9
2246 Female, age 85, both hemispheres 107.6
2528 Male, age 74, both hemispheres 107.5
2531 Female, age 67, both hemispheres 102.3
Entorhinal gyrus
nTPM: 110.2
1938 Female, age 85, left hemisphere 116.1
2764 Male, age 80, right hemisphere 115.6
2117 Female, age 91, right hemisphere 112.4
1787 Male, age 76, left hemisphere 110.4
2613 Female, age 94, left hemisphere 105.9
2686 Male, age 75, right hemisphere 100.8
Hippocampus, CA1
nTPM: 121.9
2749 Male, age 80, left hemisphere 147.6
2045 Male, age 76, both hemispheres 127.5
2527 Male, age 74, both hemispheres 116.6
1873 Female, age 85, both hemispheres 112.2
2082 Female, age 91, right hemisphere 105.6
Hippocampus, CA2
nTPM: 113.4
1892 Male, age 76, both hemispheres 121.9
2249 Male, age 74, both hemispheres 119.2
1963 Male, age 80, left hemisphere 114.6
1940 Female, age 85, left hemisphere 113.8
2113 Female, age 91, right hemisphere 106.7
2437 Female, age 94, left hemisphere 104.4
Hippocampus, CA3
nTPM: 115.7
2436 Male, age 74, both hemispheres 136.5
2137 Male, age 80, left hemisphere 134.9
1867 Male, age 76, both hemispheres 118.3
2620 Female, age 94, left hemisphere 104.1
2861 Female, age 67, both hemispheres 101.6
1891 Female, age 85, both hemispheres 99.1
Parahippocampal cortex
nTPM: 119.2
2250 Female, age 67, right hemisphere 140.2
1850 Male, age 80, both hemispheres 133.4
2532 Female, age 72, left hemisphere 120.1
2245 Female, age 91, both hemispheres 119.4
1933 Female, age 85, both hemispheres 118.6
2018 Male, age 76, both hemispheres 115.3
2622 Female, age 67, right hemisphere 115.3
1990 Female, age 91, right hemisphere 112.0
2693 Female, age 94, both hemispheres 110.5
2692 Male, age 74, both hemispheres 107.4
Perirhinal gyrus
nTPM: 131.0
1794 Male, age 80, right hemisphere 142.3
1841 Female, age 85, right hemisphere 136.1
2521 Female, age 94, right hemisphere 130.4
1847 Female, age 91, left hemisphere 127.0
2848 Male, age 76, right hemisphere 119.1
Subiculum
nTPM: 104.6
2729 Female, age 91, right hemisphere 108.0
2619 Male, age 74, both hemispheres 106.8
1901 Male, age 80, both hemispheres 106.7
1977 Female, age 85, both hemispheres 106.2
2438 Female, age 94, left hemisphere 103.8
2042 Male, age 76, both hemispheres 96.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 121.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 121.1
Samples: 197

Max nTPM: 204.7
Min nTPM: 62.2
Std nTPM: 28.3
Median nTPM: 118.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 204.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 199.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 197.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 186.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 182.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 180.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 180.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 175.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 171.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 170.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 169.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 374.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 374.8
FF:10169-103B7 60 years, female 442.6
FF:10153-102I9 76 years, female 307.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 132.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 115.9
Samples: 4

Max nTPM: 140.2
Min nTPM: 89.7
Sample A Female 140.2
Sample B Female 117.7
Sample C Male 115.9
Sample D Male 89.7
Entorhinal cortex
nTPM: 128.6
Samples: 4

Max nTPM: 138.3
Min nTPM: 109.2
Sample A Female 138.3
Sample B Female 130.9
Sample C Male 135.8
Sample D Male 109.2
Subiculum
nTPM: 114.9
Samples: 4

Max nTPM: 138.6
Min nTPM: 101.8
Sample A Female 138.6
Sample B Female 101.8
Sample C Male 111.7
Sample D Male 107.3
Ventral hippocampus
nTPM: 132.4
Samples: 4

Max nTPM: 183.6
Min nTPM: 90.3
Sample A Female 150.9
Sample B Female 90.3
Sample C Male 183.6
Sample D Male 104.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 315.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 315.7
Samples: 4

Max nTPM: 363.7
Min nTPM: 286.0
Sample A Male 315.7
Sample B Male 297.3
Sample C Female 286.0
Sample D Female 363.7
Hippocampal formation
nTPM: 279.0
Samples: 4

Max nTPM: 302.0
Min nTPM: 255.7
Sample A Male 255.7
Sample B Male 274.7
Sample C Female 302.0
Sample D Female 283.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.8
68799083 Antisense, RP_050217_02_A05, Mouse strain C57BL/6J (56 days, male) 17.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.