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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:135.4 nTPM
HPA:135.4 nTPM
GTEx:147.8 nTPM
FANTOM5:376.8 Scaled Tags Per Million
Pig:189.0 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 135.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 122.9
1981 Female, age 72, midline 135.7
2194 Female, age 79, both hemispheres 126.5
2816 Male, age 47, midline 120.6
2565 Male, age 75, midline 116.3
2048 Male, age 55, midline 115.2
Cervical spinal cord, dorsal horn
nTPM: 135.4
2296 Male, age 66, both hemispheres 155.6
2173 Female, age 72, unknown 139.4
2069 Male, age 47, both hemispheres 138.7
2721 Male, age 90, both hemispheres 128.5
2297 Male, age 75, both hemispheres 127.7
1877 Male, age 55, unknown 122.7
Cervical spinal cord, ventral horn
nTPM: 129.0
2098 Female, age 72, unknown 143.8
2480 Male, age 75, both hemispheres 131.3
2295 Male, age 66, both hemispheres 129.7
2809 Male, age 90, both hemispheres 128.4
2068 Male, age 55, unknown 121.3
2820 Female, age 79, both hemispheres 119.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 147.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 147.8
Samples: 159

Max nTPM: 259.5
Min nTPM: 92.0
Std nTPM: 26.4
Median nTPM: 145.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 259.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 215.9
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 212.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 203.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 200.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 199.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 199.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 198.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 196.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 194.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 192.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 191.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 190.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 188.8
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 187.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 182.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 182.6
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 182.5
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 180.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 179.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 179.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 178.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 176.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 176.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 175.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 174.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 174.3
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 171.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 171.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 169.4
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 167.6
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 166.9
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 164.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 163.6
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 163.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 163.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 162.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 161.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 160.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 160.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 160.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 160.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 160.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 160.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 159.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 159.3
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 158.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 158.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 158.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 158.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 157.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 157.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 157.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 157.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 157.4
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 157.3
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 156.1
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 156.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 155.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 153.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 153.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 152.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 152.3
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 151.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 151.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 151.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 149.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 149.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 148.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 148.2
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 148.2
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 147.9
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 147.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 147.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 147.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 146.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 145.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 145.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 145.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 145.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 144.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 144.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 143.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 143.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 143.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 143.1
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 142.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 142.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 141.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 140.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 140.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 139.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 139.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 139.5
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 138.4
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 138.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 138.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 136.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 136.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 136.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 135.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 135.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 135.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 135.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 134.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 134.6
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 133.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 132.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 132.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 132.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 132.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 131.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 130.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 130.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 129.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 129.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 129.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 129.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 128.9
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 128.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 128.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 128.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 127.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 127.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 127.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 126.8
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 126.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 126.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 126.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 125.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 125.5
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 125.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 124.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 124.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 123.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 123.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 122.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 121.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 121.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 120.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 119.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 119.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 119.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 118.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 116.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 116.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 115.9
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 114.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 110.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 110.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 109.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 108.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 107.0
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 104.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 102.0
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 100.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 99.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 99.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 92.0
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 376.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 376.8
FF:10181-103D1 60 years, female 385.7
FF:10159-103A6 76 years, female 368.0

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 189.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 185.1
Samples: 4

Max nTPM: 218.9
Min nTPM: 159.6
Sample A Female 171.6
Sample B Female 159.6
Sample C Male 218.9
Sample D Male 190.1
Ventral spinal cord
nTPM: 189.1
Samples: 4

Max nTPM: 226.6
Min nTPM: 155.3
Sample A Female 185.5
Sample B Female 188.8
Sample C Male 226.6
Sample D Male 155.3

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