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CD59
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BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:337.0 nTPM
HPA:337.0 nTPM
FANTOM5:150.3 Scaled Tags Per Million

THALAMUS - HPA Brain RNA-seq
Max nTPM 337.0
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 292.4
2396 Male, age 61, right hemisphere 335.8
2032 Female, age 42, unknown 279.3
2497 Male, age 66, unknown 262.0
Centromedial thalamic nucleus
nTPM: 295.7
2401 Male, age 76, right hemisphere 311.1
2279 Female, age 85, left hemisphere 280.2
Habenula
nTPM: 303.1
2252 Male, age 62, unknown 317.7
2276 Male, age 66, unknown 314.2
1957 Male, age 80, both hemispheres 299.7
2203 Male, age 61, left hemisphere 280.6
Lateral geniculate body
nTPM: 302.0
2857 Male, age 74, right hemisphere 318.6
2575 Female, age 94, right hemisphere 318.0
2106 Female, age 67, right hemisphere 317.0
2035 Female, age 72, unknown 310.9
1953 Male, age 62, unknown 296.6
2841 Male, age 80, both hemispheres 292.8
2399 Male, age 61, left hemisphere 291.8
2659 Male, age 66, unknown 270.2
Lateral thalamic nuclei
nTPM: 287.2
2573 Female, age 94, left hemisphere 308.5
1903 Male, age 76, left hemisphere 291.3
2765 Female, age 67, both hemispheres 285.0
2577 Male, age 74, both hemispheres 276.2
2661 Female, age 72, unknown 275.2
Medial dorsal thalamic nucleus
nTPM: 300.4
2572 Female, age 94, right hemisphere 388.1
1971 Male, age 61, right hemisphere 330.2
2498 Male, age 66, unknown 310.7
2402 Female, age 67, both hemispheres 307.6
2026 Male, age 62, unknown 304.0
1810 Male, age 48, unknown 303.3
1859 Male, age 76, both hemispheres 301.5
1930 Female, age 42, unknown 298.0
2576 Male, age 74, both hemispheres 290.8
2039 Female, age 72, unknown 284.4
2283 Male, age 80, right hemisphere 272.5
2492 Male, age 75, right hemisphere 267.8
2660 Female, age 72, unknown 246.4
Medial geniculate body
nTPM: 286.3
2650 Female, age 94, left hemisphere 321.5
2657 Male, age 74, right hemisphere 311.4
2049 Male, age 76, both hemispheres 286.3
2217 Female, age 72, unknown 279.7
2207 Male, age 80, right hemisphere 279.0
2571 Male, age 75, right hemisphere 263.0
1811 Female, age 42, unknown 262.9
Nucleus reuniens
nTPM: 272.5
2205 Male, age 80, left hemisphere 284.2
2212 Female, age 67, left hemisphere 284.1
2210 Female, age 85, left hemisphere 249.1
Nucleus rhomboideus
nTPM: 278.4
2213 Female, age 67, left hemisphere 305.3
2206 Male, age 80, both hemispheres 281.6
2280 Female, age 85, left hemisphere 248.3
Posterior thalamic nucleus
nTPM: 329.1
2649 Female, age 94, both hemispheres 398.8
2655 Male, age 74, right hemisphere 311.0
2266 Male, age 76, right hemisphere 306.3
2495 Female, age 67, right hemisphere 300.3
Pulvinar
nTPM: 293.2
1972 Male, age 62, unknown 312.3
2398 Male, age 61, left hemisphere 302.6
2499 Male, age 66, unknown 300.2
1932 Male, age 80, right hemisphere 299.0
1899 Female, age 42, unknown 292.5
2496 Female, age 67, right hemisphere 290.7
2724 Male, age 74, right hemisphere 287.0
2214 Male, age 76, right hemisphere 285.0
2582 Female, age 72, unknown 282.1
1929 Male, age 48, unknown 280.2
Subthalamic nucleus
nTPM: 289.5
2779 Female, age 42, unknown 301.5
2658 Male, age 74, both hemispheres 300.8
2282 Male, age 61, both hemispheres 300.3
2124 Male, age 62, unknown 298.6
2406 Female, age 72, unknown 292.9
2275 Male, age 66, unknown 289.9
2056 Female, age 72, unknown 271.8
2216 Male, age 48, unknown 260.3
Ventral posterolateral thalamic nucleus
nTPM: 283.7
2740 Male, age 76, right hemisphere 315.4
2397 Male, age 61, right hemisphere 311.6
2197 Male, age 80, both hemispheres 284.6
2570 Male, age 75, right hemisphere 275.4
2578 Male, age 74, both hemispheres 270.6
2581 Female, age 72, unknown 244.6
Ventral posteromedial thalamic nucleus
nTPM: 286.8
2202 Male, age 61, left hemisphere 331.7
2127 Male, age 76, right hemisphere 286.6
2653 Male, age 74, both hemispheres 283.5
2758 Male, age 80, both hemispheres 273.1
2281 Male, age 75, right hemisphere 259.0
Ventral thalamic nuclei
nTPM: 282.1
1845 Male, age 48, unknown 323.5
1860 Male, age 76, both hemispheres 312.3
2285 Male, age 62, unknown 278.5
2580 Male, age 66, unknown 277.2
2204 Male, age 80, both hemispheres 273.8
2858 Female, age 72, unknown 273.5
2291 Female, age 72, unknown 272.9
1912 Female, age 42, unknown 270.9
2652 Male, age 74, left hemisphere 255.9
Ventromedial nucleus
nTPM: 337.0
1822 Female, age 42, unknown 344.5
1982 Female, age 72, unknown 329.5
Zona incerta
nTPM: 266.8
2822 Male, age 74, right hemisphere 281.8
2208 Male, age 80, right hemisphere 281.5
2403 Male, age 62, unknown 269.2
2215 Male, age 66, unknown 264.1
2663 Female, age 72, unknown 237.3

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 150.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 150.3
FF:10154-103A1 76 years, female 150.3

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