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CD59
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BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:340.9 nTPM
HPA:340.9 nTPM
FANTOM5:291.7 Scaled Tags Per Million

PONS - HPA Brain RNA-seq
Max nTPM 340.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 284.9
2090 Male, age 80, both hemispheres 293.4
2301 Female, age 85, both hemispheres 283.0
1984 Male, age 76, both hemispheres 281.9
2188 Female, age 91, both hemispheres 281.1
Dorsal cochlear nucleus
nTPM: 316.9
2802 Male, age 74, right hemisphere 334.5
2378 Male, age 80, both hemispheres 330.0
2058 Male, age 76, both hemispheres 319.6
2370 Male, age 61, both hemispheres 306.6
2187 Female, age 91, both hemispheres 293.9
Dorsal tegmental nucleus
nTPM: 322.8
2083 Male, age 80, both hemispheres 337.0
2358 Male, age 61, both hemispheres 330.5
2326 Male, age 74, both hemispheres 315.3
1936 Male, age 76, left hemisphere 308.4
Dorsolateral tegmental area
nTPM: 318.5
2654 Male, age 80, both hemispheres 335.7
2337 Male, age 61, both hemispheres 321.6
2751 Female, age 85, both hemispheres 318.8
2360 Male, age 74, both hemispheres 311.9
2141 Male, age 76, both hemispheres 304.4
Kolliker-Fuse nucleus
nTPM: 312.4
2163 Male, age 80, both hemispheres 365.7
2315 Male, age 76, right hemisphere 298.3
2793 Female, age 91, left hemisphere 273.2
Lateral lemniscal nuclei
nTPM: 299.7
2036 Male, age 80, both hemispheres 322.9
2169 Male, age 76, both hemispheres 315.8
2746 Female, age 85, left hemisphere 303.3
2453 Male, age 74, right hemisphere 288.9
2320 Female, age 91, left hemisphere 267.5
Lateral parabrachial nucleus
nTPM: 309.6
2139 Female, age 85, right hemisphere 329.1
2790 Male, age 61, both hemispheres 316.8
2013 Male, age 80, both hemispheres 302.8
2792 Male, age 76, both hemispheres 289.5
Lateral vestibular nucleus
nTPM: 311.6
2184 Male, age 76, both hemispheres 338.1
2311 Male, age 80, both hemispheres 285.1
Locus coeruleus
nTPM: 340.9
2014 Male, age 55, unknown 373.9
2788 Male, age 74, unknown 367.2
2123 Female, age 91, both hemispheres 354.8
2317 Female, age 72, unknown 339.7
1980 Male, age 76, both hemispheres 338.5
2162 Male, age 80, both hemispheres 310.3
2720 Male, age 74, both hemispheres 302.0
Medial olivary nucleus
nTPM: 301.6
2138 Female, age 91, both hemispheres 322.1
1962 Male, age 76, both hemispheres 299.1
1943 Male, age 61, both hemispheres 294.7
2851 Male, age 80, both hemispheres 290.4
Medial parabrachial nucleus
nTPM: 309.1
2156 Male, age 61, both hemispheres 333.6
2786 Male, age 76, both hemispheres 311.0
2170 Female, age 91, both hemispheres 308.5
2854 Male, age 80, both hemispheres 301.0
2463 Female, age 85, right hemisphere 291.7
Medial periolivary nuclei
nTPM: 308.3
2171 Female, age 85, both hemispheres 342.9
2063 Male, age 76, both hemispheres 334.9
2791 Male, age 74, right hemisphere 301.6
2081 Male, age 80, both hemispheres 284.4
2458 Female, age 91, both hemispheres 277.8
Motor facial nucleus
nTPM: 301.0
2062 Male, age 76, both hemispheres 336.6
2795 Female, age 91, both hemispheres 331.4
2365 Male, age 74, right hemisphere 296.0
2126 Male, age 61, both hemispheres 285.0
2697 Female, age 85, both hemispheres 279.6
2327 Male, age 80, both hemispheres 277.3
Motor trigeminal nucleus
nTPM: 287.5
2309 Male, age 76, both hemispheres 315.9
2079 Male, age 80, both hemispheres 287.7
2335 Male, age 61, both hemispheres 285.8
2560 Male, age 74, both hemispheres 279.7
2321 Female, age 91, both hemispheres 268.4
Nuclei of the trapezoid body
nTPM: 310.2
2735 Female, age 85, both hemispheres 332.0
1983 Male, age 76, both hemispheres 326.7
2159 Male, age 61, both hemispheres 305.9
2368 Female, age 91, both hemispheres 293.6
2166 Male, age 80, both hemispheres 292.7
Paramedian reticular nucleus
nTPM: 324.0
2050 Female, age 85, both hemispheres 344.6
2057 Male, age 80, both hemispheres 328.5
2052 Male, age 76, both hemispheres 327.3
2313 Male, age 61, both hemispheres 295.7
Pontine nuclei
nTPM: 307.7
2787 Female, age 85, both hemispheres 336.1
1863 Male, age 55, unknown 334.6
2109 Female, age 72, unknown 321.8
2727 Male, age 61, right hemisphere 319.7
1968 Male, age 76, left hemisphere 316.3
2115 Male, age 80, left hemisphere 285.4
2454 Male, age 74, left hemisphere 275.1
2319 Female, age 91, both hemispheres 272.8
Pontine raphe nucleus
nTPM: 320.1
2122 Female, age 85, midline 322.5
2853 Male, age 76, midline 317.7
Posteroventral cochlear nucleus
nTPM: 302.2
2752 Female, age 85, both hemispheres 323.8
2341 Male, age 80, both hemispheres 306.2
2070 Male, age 76, both hemispheres 304.5
2371 Male, age 61, both hemispheres 302.6
2135 Female, age 91, both hemispheres 273.9
Principal sensory trigeminal nucleus
nTPM: 302.3
2324 Male, age 76, both hemispheres 329.7
2158 Male, age 61, both hemispheres 309.0
2008 Male, age 80, left hemisphere 299.5
2367 Female, age 91, left hemisphere 271.1
Reticular pontine nucleus, caudal
nTPM: 286.7
2092 Male, age 76, both hemispheres 309.6
2332 Male, age 80, right hemisphere 283.6
2457 Female, age 91, both hemispheres 278.3
2559 Male, age 74, both hemispheres 275.5
Reticular pontine nucleus, oral
nTPM: 300.6
1939 Male, age 80, both hemispheres 342.2
2167 Male, age 76, both hemispheres 323.3
2012 Female, age 85, both hemispheres 314.1
2366 Female, age 91, both hemispheres 263.0
2361 Male, age 74, both hemispheres 260.6
Reticulotegmental nucleus
nTPM: 306.6
2325 Male, age 76, both hemispheres 311.5
2333 Male, age 80, both hemispheres 310.9
2322 Female, age 91, both hemispheres 308.4
2452 Male, age 74, both hemispheres 295.5
Spinal trigeminal nucleus, oral
nTPM: 313.9
2164 Male, age 80, both hemispheres 332.5
2737 Female, age 85, both hemispheres 330.0
1978 Male, age 76, both hemispheres 279.2
Subcoeruleus area
nTPM: 300.8
2323 Female, age 91, left hemisphere 310.9
1958 Male, age 80, both hemispheres 309.8
2369 Female, age 85, left hemisphere 308.7
2451 Male, age 74, both hemispheres 292.6
2089 Male, age 76, left hemisphere 282.3
Superior olive
nTPM: 300.0
1875 Female, age 85, both hemispheres 320.0
2020 Male, age 76, both hemispheres 308.8
2364 Male, age 74, right hemisphere 300.8
2329 Male, age 80, right hemisphere 287.5
2561 Female, age 91, both hemispheres 283.0
Superior vestibular nucleus
nTPM: 318.6
2383 Male, age 74, both hemispheres 331.7
2015 Male, age 80, both hemispheres 320.2
2061 Male, age 76, both hemispheres 304.0
Ventral periolivary nuclei
nTPM: 315.3
2130 Female, age 85, both hemispheres 347.6
2023 Male, age 76, both hemispheres 313.4
2165 Male, age 80, both hemispheres 311.7
2794 Female, age 91, left hemisphere 288.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 308.5
2359 Male, age 61, both hemispheres 334.9
2840 Female, age 85, both hemispheres 325.2
2161 Male, age 80, both hemispheres 302.4
2456 Female, age 91, both hemispheres 301.7
1959 Male, age 76, both hemispheres 300.7
2449 Male, age 74, both hemispheres 286.2

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 291.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 290.6
FF:10182-103D2 60 years, female 315.8
FF:10165-103B3 76 years, female 265.4
Pons
Scaled Tags Per Million: 291.7
FF:10033-101E6 18-54 years, mixed 291.7

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