HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:154.1 nTPM
HPA:154.1 nTPM
GTEx:101.2 nTPM
FANTOM5:384.6 Scaled Tags Per Million
Pig:200.8 nTPM
Mouse:256.2 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001306Antibody CAB033665
Glial cells Not detectedMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 154.1
Sample id Sample description nTPM
Hippocampus
nTPM: 143.3
1898 Male, age 80, left hemisphere 157.6
2529 Female, age 94, left hemisphere 148.4
1855 Male, age 76, left hemisphere 146.4
2621 Female, age 67, right hemisphere 138.7
1911 Female, age 85, right hemisphere 135.0
2148 Female, age 91, left hemisphere 133.5
Dentate gyrus
nTPM: 143.0
2010 Male, age 76, both hemispheres 157.3
2530 Female, age 94, left hemisphere 143.1
2246 Female, age 85, both hemispheres 142.9
1927 Female, age 91, both hemispheres 142.8
2528 Male, age 74, both hemispheres 139.7
2531 Female, age 67, both hemispheres 132.0
Entorhinal gyrus
nTPM: 139.8
1938 Female, age 85, left hemisphere 153.0
2764 Male, age 80, right hemisphere 146.7
1787 Male, age 76, left hemisphere 142.9
2117 Female, age 91, right hemisphere 137.3
2686 Male, age 75, right hemisphere 133.3
2613 Female, age 94, left hemisphere 125.7
Hippocampus, CA1
nTPM: 154.1
2045 Male, age 76, both hemispheres 172.7
2749 Male, age 80, left hemisphere 167.6
1873 Female, age 85, both hemispheres 152.0
2527 Male, age 74, both hemispheres 144.7
2082 Female, age 91, right hemisphere 133.4
Hippocampus, CA2
nTPM: 148.4
1892 Male, age 76, both hemispheres 181.3
1963 Male, age 80, left hemisphere 148.4
2249 Male, age 74, both hemispheres 146.4
1940 Female, age 85, left hemisphere 140.9
2437 Female, age 94, left hemisphere 139.1
2113 Female, age 91, right hemisphere 134.3
Hippocampus, CA3
nTPM: 146.7
1867 Male, age 76, both hemispheres 172.0
2137 Male, age 80, left hemisphere 155.2
2436 Male, age 74, both hemispheres 143.6
1891 Female, age 85, both hemispheres 142.2
2861 Female, age 67, both hemispheres 133.7
2620 Female, age 94, left hemisphere 133.4
Parahippocampal cortex
nTPM: 143.6
1850 Male, age 80, both hemispheres 158.1
1933 Female, age 85, both hemispheres 154.1
2018 Male, age 76, both hemispheres 145.2
2245 Female, age 91, both hemispheres 144.5
2250 Female, age 67, right hemisphere 144.4
1990 Female, age 91, right hemisphere 143.9
2532 Female, age 72, left hemisphere 143.8
2692 Male, age 74, both hemispheres 136.8
2693 Female, age 94, both hemispheres 133.0
2622 Female, age 67, right hemisphere 132.1
Perirhinal gyrus
nTPM: 153.2
2848 Male, age 76, right hemisphere 162.2
1841 Female, age 85, right hemisphere 159.4
1847 Female, age 91, left hemisphere 155.9
1794 Male, age 80, right hemisphere 151.8
2521 Female, age 94, right hemisphere 136.6
Subiculum
nTPM: 143.7
2042 Male, age 76, both hemispheres 156.2
1901 Male, age 80, both hemispheres 151.3
1977 Female, age 85, both hemispheres 150.5
2438 Female, age 94, left hemisphere 139.9
2619 Male, age 74, both hemispheres 134.3
2729 Female, age 91, right hemisphere 130.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 101.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.2
Samples: 197

Max nTPM: 670.6
Min nTPM: 47.4
Std nTPM: 60.5
Median nTPM: 89.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 670.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 393.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 354.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 270.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 236.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 234.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 215.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 200.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 186.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 186.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 171.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 384.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 384.6
FF:10169-103B7 60 years, female 397.6
FF:10153-102I9 76 years, female 371.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 200.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 200.8
Samples: 4

Max nTPM: 257.4
Min nTPM: 172.0
Sample A Female 257.4
Sample B Female 199.9
Sample C Male 173.8
Sample D Male 172.0
Entorhinal cortex
nTPM: 190.9
Samples: 4

Max nTPM: 209.3
Min nTPM: 168.5
Sample A Female 209.3
Sample B Female 202.9
Sample C Male 183.0
Sample D Male 168.5
Subiculum
nTPM: 182.1
Samples: 4

Max nTPM: 227.7
Min nTPM: 151.2
Sample A Female 227.7
Sample B Female 160.0
Sample C Male 151.2
Sample D Male 189.5
Ventral hippocampus
nTPM: 170.6
Samples: 4

Max nTPM: 202.6
Min nTPM: 137.3
Sample A Female 202.6
Sample B Female 137.3
Sample C Male 145.5
Sample D Male 197.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 256.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 247.3
Samples: 4

Max nTPM: 268.6
Min nTPM: 213.8
Sample A Male 213.8
Sample B Male 259.2
Sample C Female 247.6
Sample D Female 268.6
Hippocampal formation
nTPM: 256.2
Samples: 4

Max nTPM: 273.8
Min nTPM: 241.7
Sample A Male 260.4
Sample B Male 241.7
Sample C Female 273.8
Sample D Female 249.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
70528611 Antisense, RP_050623_03_A02, Mouse strain C57BL/6J (56 days, male) 3.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.