HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.9 nTPM
HPA:46.9 nTPM
GTEx:87.7 nTPM
FANTOM5:23.9 Scaled Tags Per Million
Pig:24.9 nTPM
Mouse:74.6 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030594Antibody HPA055589Antibody CAB033542
Glial cells Not detectedLowMedium
Neuronal cells MediumMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.9
Sample id Sample description nTPM
Hippocampus
nTPM: 43.9
1898 Male, age 80, left hemisphere 49.0
1855 Male, age 76, left hemisphere 44.8
2529 Female, age 94, left hemisphere 43.6
2621 Female, age 67, right hemisphere 43.6
1911 Female, age 85, right hemisphere 41.7
2148 Female, age 91, left hemisphere 40.7
Dentate gyrus
nTPM: 43.4
1927 Female, age 91, both hemispheres 46.7
2530 Female, age 94, left hemisphere 44.9
2246 Female, age 85, both hemispheres 44.3
2010 Male, age 76, both hemispheres 44.2
2528 Male, age 74, both hemispheres 40.6
2531 Female, age 67, both hemispheres 39.7
Entorhinal gyrus
nTPM: 43.5
2764 Male, age 80, right hemisphere 47.1
1938 Female, age 85, left hemisphere 45.8
2613 Female, age 94, left hemisphere 43.2
1787 Male, age 76, left hemisphere 43.1
2117 Female, age 91, right hemisphere 42.3
2686 Male, age 75, right hemisphere 39.7
Hippocampus, CA1
nTPM: 46.5
2749 Male, age 80, left hemisphere 58.1
1873 Female, age 85, both hemispheres 46.6
2527 Male, age 74, both hemispheres 44.1
2045 Male, age 76, both hemispheres 43.8
2082 Female, age 91, right hemisphere 40.1
Hippocampus, CA2
nTPM: 43.0
1963 Male, age 80, left hemisphere 47.0
1892 Male, age 76, both hemispheres 46.8
2249 Male, age 74, both hemispheres 43.0
2437 Female, age 94, left hemisphere 42.9
2113 Female, age 91, right hemisphere 39.7
1940 Female, age 85, left hemisphere 38.8
Hippocampus, CA3
nTPM: 44.6
2137 Male, age 80, left hemisphere 50.8
2436 Male, age 74, both hemispheres 45.1
2620 Female, age 94, left hemisphere 44.6
1867 Male, age 76, both hemispheres 43.4
1891 Female, age 85, both hemispheres 42.4
2861 Female, age 67, both hemispheres 41.4
Parahippocampal cortex
nTPM: 43.5
2245 Female, age 91, both hemispheres 47.8
1850 Male, age 80, both hemispheres 46.6
1933 Female, age 85, both hemispheres 46.6
2532 Female, age 72, left hemisphere 45.8
1990 Female, age 91, right hemisphere 44.5
2250 Female, age 67, right hemisphere 44.3
2018 Male, age 76, both hemispheres 42.6
2692 Male, age 74, both hemispheres 39.7
2693 Female, age 94, both hemispheres 38.4
2622 Female, age 67, right hemisphere 38.3
Perirhinal gyrus
nTPM: 46.9
1847 Female, age 91, left hemisphere 52.1
1794 Male, age 80, right hemisphere 47.9
1841 Female, age 85, right hemisphere 46.9
2521 Female, age 94, right hemisphere 46.1
2848 Male, age 76, right hemisphere 41.3
Subiculum
nTPM: 43.1
1901 Male, age 80, both hemispheres 45.9
2438 Female, age 94, left hemisphere 45.8
1977 Female, age 85, both hemispheres 44.7
2619 Male, age 74, both hemispheres 42.8
2042 Male, age 76, both hemispheres 41.3
2729 Female, age 91, right hemisphere 38.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.7
Samples: 197

Max nTPM: 223.9
Min nTPM: 26.3
Std nTPM: 32.6
Median nTPM: 82.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 223.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 210.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 195.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 192.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 185.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 168.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 157.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 153.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 149.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 147.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 143.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.9
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 14.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.9
Samples: 4

Max nTPM: 33.9
Min nTPM: 17.9
Sample A Female 33.9
Sample B Female 22.6
Sample C Male 25.2
Sample D Male 17.9
Entorhinal cortex
nTPM: 24.7
Samples: 4

Max nTPM: 28.1
Min nTPM: 20.2
Sample A Female 24.8
Sample B Female 28.1
Sample C Male 25.7
Sample D Male 20.2
Subiculum
nTPM: 20.5
Samples: 4

Max nTPM: 29.2
Min nTPM: 16.4
Sample A Female 29.2
Sample B Female 18.9
Sample C Male 17.5
Sample D Male 16.4
Ventral hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 27.2
Min nTPM: 16.2
Sample A Female 26.6
Sample B Female 16.2
Sample C Male 27.2
Sample D Male 20.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.8
Samples: 4

Max nTPM: 73.2
Min nTPM: 61.8
Sample A Male 61.8
Sample B Male 73.2
Sample C Female 71.5
Sample D Female 64.5
Hippocampal formation
nTPM: 74.6
Samples: 4

Max nTPM: 81.6
Min nTPM: 66.7
Sample A Male 80.5
Sample B Male 66.7
Sample C Female 69.4
Sample D Female 81.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
68191414 Antisense, RP_041129_01_B05, Mouse strain C57BL/6J (56 days, male) 1.8

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