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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:3736.5 nTPM
FANTOM5:1835.3 Scaled Tags Per Million
Pig:321.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041602Antibody CAB020769
Glial cells HighHigh
Neuronal cells HighHigh




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 3736.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 3736.5
Samples: 246

Max nTPM: 15995.4
Min nTPM: 950.2
Std nTPM: 1773.7
Median nTPM: 3360.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 15995.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 11335.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 10475.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 9442.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 9324.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 8108.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 8062.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 7154.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 7142.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 7083.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 6944.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 6815.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 6808.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 6806.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 6764.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 6506.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 6424.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 6375.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 6355.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 6303.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 6122.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 5906.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 5899.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 5880.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 5848.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 5835.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 5731.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 5632.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 5598.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 5542.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 5351.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 5307.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 5261.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 5248.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 5244.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 5173.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 5149.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 5136.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 5128.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 5108.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 5024.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 5023.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 5015.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 4991.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 4958.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 4888.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 4865.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 4864.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 4749.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 4728.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 4704.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 4690.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 4667.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 4647.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 4627.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 4614.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 4589.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 4541.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 4533.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 4468.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 4454.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 4434.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 4409.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 4378.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 4341.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 4313.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 4305.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 4249.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 4246.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 4242.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 4199.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 4159.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 4152.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 4143.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 4143.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 4100.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 4084.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 4062.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 4057.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 4031.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 4024.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 3970.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 3943.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 3904.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 3898.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 3884.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 3843.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 3842.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 3840.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 3814.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 3778.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 3747.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 3745.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 3736.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 3729.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 3729.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 3713.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 3711.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 3704.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 3679.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 3675.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 3662.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 3645.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 3618.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 3613.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 3589.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 3576.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 3558.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 3556.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 3544.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 3523.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 3501.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 3495.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 3444.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 3432.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 3425.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 3417.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 3413.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 3405.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 3382.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 3381.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 3373.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 3361.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 3359.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 3353.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 3328.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 3310.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 3299.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 3299.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 3284.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 3279.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 3254.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 3228.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 3222.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 3158.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 3157.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 3146.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 3130.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 3126.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 3126.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 3117.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 3106.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 3100.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 3087.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 3076.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 3035.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 3023.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 3007.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 2999.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 2997.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 2988.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 2976.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 2972.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 2959.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 2958.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 2939.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 2928.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 2926.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 2925.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 2924.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 2884.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 2863.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 2851.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 2850.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 2841.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 2833.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 2821.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 2798.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 2790.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 2784.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 2743.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 2735.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 2724.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 2691.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 2676.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 2674.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 2667.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 2658.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 2652.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 2639.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 2616.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 2600.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 2589.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 2580.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 2566.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2565.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 2539.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 2520.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2519.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 2508.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 2506.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 2495.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 2490.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 2480.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 2457.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 2455.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 2452.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 2419.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 2410.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 2368.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 2362.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 2349.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 2339.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 2338.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 2332.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 2299.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 2298.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 2289.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 2287.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 2264.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 2254.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 2252.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 2219.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 2214.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 2212.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 2192.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 2189.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 2153.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 2127.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 2093.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 2073.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 2052.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 2044.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 2030.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 2009.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1996.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1995.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1979.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1974.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1944.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1924.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1897.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1885.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1866.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1856.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1807.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1781.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1766.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1748.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 1710.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1688.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1675.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1415.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1363.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1334.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 950.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1835.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1835.3
FF:10164-103B2 76 years, female 1835.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 321.8
Pig sample Sample description nTPM
Caudate
nTPM: 321.8
Samples: 4

Max nTPM: 370.6
Min nTPM: 269.0
Sample A Female 290.6
Sample B Female 357.1
Sample C Male 370.6
Sample D Male 269.0

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