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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:3355.3 nTPM
FANTOM5:770.5 Scaled Tags Per Million
Pig:2360.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA004011Antibody CAB017779
Glial cells HighHigh
Neuronal cells HighMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 3355.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 3355.3
Samples: 246

Max nTPM: 12073.3
Min nTPM: 783.7
Std nTPM: 1549.5
Median nTPM: 3128.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 12073.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 8870.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 7971.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 7651.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 6975.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 6931.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 6908.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 6863.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 6839.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 6701.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 6379.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 6236.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 6172.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 6075.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 6057.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 6047.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 5971.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 5941.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 5879.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 5813.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 5704.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 5579.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 5553.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 5486.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 5408.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 5379.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 5348.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 5324.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 5239.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 5137.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 5124.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 5080.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 5059.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 5052.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 5049.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 5001.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 4967.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 4897.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 4831.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 4760.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 4684.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 4652.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 4617.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 4605.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 4594.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 4562.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 4522.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 4435.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 4427.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 4360.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 4358.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 4287.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 4279.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 4278.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 4258.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 4252.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 4245.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 4202.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 4083.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 4053.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 4007.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 3969.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 3967.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 3965.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 3953.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 3917.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 3915.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 3901.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 3886.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 3881.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 3875.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 3851.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 3848.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 3847.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 3843.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 3832.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 3824.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 3792.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 3792.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 3785.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 3760.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 3718.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 3715.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 3704.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 3691.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 3685.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 3659.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 3632.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 3533.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 3526.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 3524.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 3511.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 3485.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 3458.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 3455.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 3448.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 3444.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 3416.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 3412.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 3405.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 3392.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 3387.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 3380.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 3375.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 3365.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 3352.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 3349.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 3347.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 3339.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 3338.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 3332.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 3332.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 3328.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 3318.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 3316.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 3290.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 3239.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 3237.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 3216.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 3165.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 3160.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 3146.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 3132.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 3124.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 3048.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 3047.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 3030.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 3023.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 2992.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 2963.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 2938.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 2934.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 2923.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 2912.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 2902.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 2872.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 2840.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 2833.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 2830.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 2818.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 2803.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 2778.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 2772.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 2764.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 2752.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 2745.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 2742.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 2739.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 2722.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 2704.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 2703.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 2697.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 2651.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 2615.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 2609.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 2597.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 2597.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 2579.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 2578.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 2573.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 2570.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 2531.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 2527.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 2522.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 2520.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 2498.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 2483.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 2447.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 2445.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 2408.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 2400.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 2396.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 2387.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 2385.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 2384.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 2381.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 2364.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 2361.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 2352.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2320.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 2313.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 2289.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 2276.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 2239.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 2191.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 2181.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 2160.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 2155.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 2148.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 2124.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 2120.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 2110.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 2102.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 2095.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 2091.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 2087.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2079.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 2078.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 2074.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 2053.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 2016.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 2007.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 2004.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 2000.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1985.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1959.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1956.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1948.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1942.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1920.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1912.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1854.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1854.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1849.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1815.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1806.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 1786.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1777.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1753.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1739.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 1738.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1712.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1696.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1687.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1676.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1653.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1652.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1612.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1586.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1556.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1546.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 1543.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1525.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1501.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1454.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1423.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1373.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1319.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1286.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1286.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1280.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1206.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1182.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1127.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 880.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 783.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 770.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 770.5
FF:10164-103B2 76 years, female 770.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2360.6
Pig sample Sample description nTPM
Caudate
nTPM: 2360.6
Samples: 4

Max nTPM: 2953.7
Min nTPM: 1952.1
Sample A Female 2257.9
Sample B Female 2278.7
Sample C Male 2953.7
Sample D Male 1952.1

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