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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 1579.4
Min nTPM: 265.7
Std nTPM: 239.5
Median nTPM:
506_1
65 years, male
1579.4
452_1
88 years, female
1276.4
173_1
67 years, male
1223.8
377_1
82 years, female
1154.9
295_1
61 years, female
1107.0
379_1
60 years, male
1102.3
264_1
73 years, female
1076.2
177_1
74 years, male
1048.7
316_1
62 years, male
1037.0
351_1
91 years, male
1019.9
376_1
75 years, female
1007.4
394_1
75 years, female
998.1
386_1
76 years, male
987.4
322_1
76 years, male
980.6
163_1
78 years, male
979.5
375_1
74 years, female
975.7
406_1
79 years, male
973.9
356_1
87 years, female
971.9
172_1
72 years, female
961.8
318_1
68 years, male
960.5
243_1
75 years, male
952.2
237_1
82 years, male
942.7
319_1
81 years, male
931.6
353_1
82 years, female
926.3
320_1
89 years, female
916.8
321_1
62 years, female
906.5
425_1
59 years, female
905.3
384_1
83 years, male
903.0
335_1
73 years, female
889.4
218_1
71 years, female
886.5
352_1
62 years, male
885.2
292_1
71 years, male
872.8
404_1
82 years, female
861.7
317_1
60 years, male
861.2
349_1
83 years, male
856.5
286_1
68 years, female
851.9
288_1
66 years, female
851.0
447_1
81 years, male
825.8
2_1
77 years, female
813.8
396_1
62 years, male
807.9
347_1
72 years, male
807.0
503_1
68 years, male
796.9
350_1
84 years, female
780.8
293_1
68 years, female
779.6
229_1
69 years, female
771.9
254_1
77 years, female
762.7
17_1
71 years, male
757.0
405_1
91 years, male
750.7
480_1
63 years, male
750.4
526_1
61 years, male
736.9
348_1
84 years, male
729.9
266_1
85 years, male
719.2
6_1
73 years, female
717.4
291_1
76 years, male
715.8
4_1
88 years, female
715.4
99_1
64 years, male
714.1
355_1
70 years, female
711.8
354_1
81 years, female
711.0
145_1
84 years, male
671.2
189_1
76 years, male
654.7
517_1
88 years, male
652.7
314_1
67 years, male
648.2
41_1
94 years, female
641.5
137_1
83 years, male
632.2
246_1
77 years, male
631.3
35_1
74 years, female
621.1
115_1
83 years, male
619.2
313_1
79 years, female
612.2
501_1
88 years, male
608.7
324_1
76 years, male
606.2
120_1
70 years, female
604.7
468_1
89 years, male
601.2
265_1
87 years, male
599.3
389_1
86 years, female
594.3
109_1
81 years, female
591.2
251_1
78 years, male
584.7
18_1
88 years, male
584.5
139_1
64 years, female
572.6
142_1
61 years, female
570.6
311_1
78 years, male
566.5
518_1
75 years, female
563.4
153_1
70 years, female
562.5
315_1
62 years, female
557.7
307_1
66 years, female
557.4
126_1
63 years, male
545.8
499_1
55 years, female
521.3
42_1
85 years, male
513.5
413_1
59 years, female
503.6
9_1
66 years, female
490.7
119_1
70 years, female
482.8
217_1
76 years, male
446.2
117_1
61 years, male
443.8
414_1
84 years, female
442.3
308_1
70 years, female
428.7
81_1
67 years, male
411.4
43_1
64 years, female
388.7
495_1
57 years, female
386.5
466_1
57 years, female
366.9
415_1
77 years, female
365.3
32_1
67 years, male
350.4
89_1
63 years, male
328.5
149_1
88 years, male
311.7
162_1
79 years, female
297.8
491_1
89 years, female
278.3
490_1
67 years, female
265.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.