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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:239.3 nTPM
GTEx:239.3 nTPM
FANTOM5:966.3 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA018122Antibody HPA027478Antibody HPA028386Antibody CAB010337
Squamous epithelial cells Not detectedMediumNot detectedLow





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 239.3
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 239.3
Samples: 156

Max nTPM: 375.9
Min nTPM: 140.5
Std nTPM: 46.1
Median nTPM: 235.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 375.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 375.1
GTEX-11I78-2026-SM-5987C 50-59 years, female 355.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 338.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 338.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 333.0
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 328.6
GTEX-QCQG-1226-SM-48U23 50-59 years, female 328.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 321.7
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 317.5
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 317.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 310.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 309.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 305.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 299.2
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 299.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 290.1
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 290.0
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 288.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 287.4
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 287.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 286.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 285.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 284.9
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 284.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 284.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 281.8
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 280.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 279.6
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 278.8
GTEX-14PKU-1326-SM-6871B 40-49 years, female 278.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 278.1
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 277.5
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 276.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 275.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 274.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 273.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 270.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 270.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 268.2
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 266.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 264.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 263.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 263.5
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 257.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 257.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 257.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 257.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 257.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 257.0
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 255.8
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 255.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 254.4
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 254.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 254.2
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 253.5
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 253.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 250.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 250.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 249.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 249.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 248.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 247.1
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 246.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 246.5
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 246.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 245.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 243.5
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 243.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 242.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 240.5
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 239.0
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 238.8
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 237.3
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 236.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 236.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 235.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 235.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 235.3
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 234.9
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 233.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 232.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 232.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 232.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 232.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 231.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 230.7
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 230.4
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 229.6
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 229.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 229.0
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 228.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 228.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 228.2
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 225.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 225.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 224.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 223.9
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 223.2
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 223.1
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 219.6
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 218.4
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 217.8
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 217.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 217.0
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 216.4
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 215.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 215.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 214.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 214.3
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 213.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 212.5
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 212.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 211.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 210.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 210.6
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 210.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 208.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 207.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 207.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 207.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 205.8
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 204.8
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 204.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 201.8
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 201.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 199.9
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 199.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 197.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 197.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 194.9
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 194.1
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 193.8
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 192.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 192.1
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 187.0
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 187.0
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 183.0
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 182.3
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 182.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 179.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 179.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 179.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 176.2
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 173.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 170.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 169.8
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 162.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 162.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 161.5
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 161.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 156.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 152.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 150.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 149.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 140.5
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 966.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 966.3
FF:10204-103F6 68 years, female 966.3

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