HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:756.3 nTPM
HPA:756.3 nTPM
GTEx:706.7 nTPM
FANTOM5:33.4 Scaled Tags Per Million
Pig:574.0 nTPM
Mouse:440.3 nTPM
Allen mouse:19.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068418
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 756.3
Sample id Sample description nTPM
Hippocampus
nTPM: 753.4
2529 Female, age 94, left hemisphere 776.4
1898 Male, age 80, left hemisphere 772.3
2621 Female, age 67, right hemisphere 757.7
2148 Female, age 91, left hemisphere 744.1
1911 Female, age 85, right hemisphere 739.1
1855 Male, age 76, left hemisphere 730.7
Dentate gyrus
nTPM: 754.8
2530 Female, age 94, left hemisphere 791.4
2246 Female, age 85, both hemispheres 749.9
2010 Male, age 76, both hemispheres 748.7
2531 Female, age 67, both hemispheres 748.1
2528 Male, age 74, both hemispheres 745.3
1927 Female, age 91, both hemispheres 745.0
Entorhinal gyrus
nTPM: 754.8
2686 Male, age 75, right hemisphere 768.0
1938 Female, age 85, left hemisphere 759.0
2764 Male, age 80, right hemisphere 754.2
1787 Male, age 76, left hemisphere 752.2
2613 Female, age 94, left hemisphere 749.3
2117 Female, age 91, right hemisphere 746.2
Hippocampus, CA1
nTPM: 746.7
2749 Male, age 80, left hemisphere 766.0
1873 Female, age 85, both hemispheres 757.7
2082 Female, age 91, right hemisphere 741.8
2527 Male, age 74, both hemispheres 737.7
2045 Male, age 76, both hemispheres 730.5
Hippocampus, CA2
nTPM: 756.3
1892 Male, age 76, both hemispheres 785.9
1963 Male, age 80, left hemisphere 769.1
2437 Female, age 94, left hemisphere 755.9
1940 Female, age 85, left hemisphere 747.6
2113 Female, age 91, right hemisphere 741.9
2249 Male, age 74, both hemispheres 737.5
Hippocampus, CA3
nTPM: 753.2
1867 Male, age 76, both hemispheres 776.0
2861 Female, age 67, both hemispheres 769.3
2137 Male, age 80, left hemisphere 754.9
1891 Female, age 85, both hemispheres 748.3
2436 Male, age 74, both hemispheres 739.7
2620 Female, age 94, left hemisphere 730.7
Parahippocampal cortex
nTPM: 742.6
1850 Male, age 80, both hemispheres 763.4
2250 Female, age 67, right hemisphere 748.3
2245 Female, age 91, both hemispheres 747.9
2018 Male, age 76, both hemispheres 747.4
1933 Female, age 85, both hemispheres 746.3
2692 Male, age 74, both hemispheres 745.5
1990 Female, age 91, right hemisphere 744.6
2532 Female, age 72, left hemisphere 737.8
2622 Female, age 67, right hemisphere 725.3
2693 Female, age 94, both hemispheres 719.6
Perirhinal gyrus
nTPM: 755.0
1841 Female, age 85, right hemisphere 770.8
1847 Female, age 91, left hemisphere 767.0
1794 Male, age 80, right hemisphere 751.4
2848 Male, age 76, right hemisphere 749.2
2521 Female, age 94, right hemisphere 736.4
Subiculum
nTPM: 742.3
1977 Female, age 85, both hemispheres 758.9
1901 Male, age 80, both hemispheres 747.4
2438 Female, age 94, left hemisphere 746.3
2042 Male, age 76, both hemispheres 739.3
2619 Male, age 74, both hemispheres 731.3
2729 Female, age 91, right hemisphere 731.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 706.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 706.7
Samples: 197

Max nTPM: 1752.5
Min nTPM: 362.9
Std nTPM: 195.2
Median nTPM: 672.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1752.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1313.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1250.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1244.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1165.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 1158.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1143.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1115.7
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 1080.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 1068.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1044.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.4
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 574.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 574.0
Samples: 4

Max nTPM: 704.5
Min nTPM: 429.2
Sample A Female 704.5
Sample B Female 500.7
Sample C Male 661.7
Sample D Male 429.2
Entorhinal cortex
nTPM: 487.6
Samples: 4

Max nTPM: 590.3
Min nTPM: 367.6
Sample A Female 418.3
Sample B Female 590.3
Sample C Male 574.0
Sample D Male 367.6
Subiculum
nTPM: 532.2
Samples: 4

Max nTPM: 718.8
Min nTPM: 436.2
Sample A Female 718.8
Sample B Female 512.5
Sample C Male 436.2
Sample D Male 461.1
Ventral hippocampus
nTPM: 488.0
Samples: 4

Max nTPM: 513.9
Min nTPM: 455.7
Sample A Female 484.0
Sample B Female 455.7
Sample C Male 498.4
Sample D Male 513.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 440.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 414.7
Samples: 4

Max nTPM: 435.6
Min nTPM: 402.2
Sample A Male 416.5
Sample B Male 404.5
Sample C Female 435.6
Sample D Female 402.2
Hippocampal formation
nTPM: 440.4
Samples: 4

Max nTPM: 501.7
Min nTPM: 410.3
Sample A Male 501.7
Sample B Male 420.8
Sample C Female 410.3
Sample D Female 428.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.4
69818317 Antisense, RP_050510_04_H04, Mouse strain C57BL/6J (56 days, male) 19.4

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