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RPL6
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BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:531.8 nTPM
GTEx:531.8 nTPM
FANTOM5:18.2 Scaled Tags Per Million
Pig:201.9 nTPM
Mouse:557.8 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 531.8
GTEx sample id Sample description nTPM
Retina
Average nTPM: 531.8
Samples: 105

Max nTPM: 713.9
Min nTPM: 392.7
Std nTPM: 70.0
Median nTPM:
379_1 60 years, male 713.9
495_1 57 years, female 690.1
307_1 66 years, female 666.2
35_1 74 years, female 663.1
384_1 83 years, male 649.6
321_1 62 years, female 644.2
120_1 70 years, female 638.9
375_1 74 years, female 636.9
315_1 62 years, female 635.1
389_1 86 years, female 634.1
218_1 71 years, female 633.3
414_1 84 years, female 629.6
153_1 70 years, female 629.1
308_1 70 years, female 625.6
447_1 81 years, male 623.8
491_1 89 years, female 623.5
119_1 70 years, female 597.1
526_1 61 years, male 595.4
237_1 82 years, male 594.4
189_1 76 years, male 589.6
376_1 75 years, female 588.8
17_1 71 years, male 587.4
145_1 84 years, male 586.4
347_1 72 years, male 580.6
126_1 63 years, male 579.0
415_1 77 years, female 577.5
139_1 64 years, female 577.4
246_1 77 years, male 576.5
311_1 78 years, male 576.5
254_1 77 years, female 573.7
2_1 77 years, female 570.4
452_1 88 years, female 569.9
4_1 88 years, female 569.0
396_1 62 years, male 564.2
265_1 87 years, male 562.4
355_1 70 years, female 562.3
41_1 94 years, female 558.6
322_1 76 years, male 558.1
348_1 84 years, male 553.8
386_1 76 years, male 553.5
162_1 79 years, female 552.8
229_1 69 years, female 549.8
117_1 61 years, male 548.8
6_1 73 years, female 547.8
413_1 59 years, female 547.3
377_1 82 years, female 547.2
490_1 67 years, female 546.6
394_1 75 years, female 537.6
173_1 67 years, male 537.3
99_1 64 years, male 533.6
243_1 75 years, male 532.1
137_1 83 years, male 531.6
405_1 91 years, male 530.8
404_1 82 years, female 527.8
266_1 85 years, male 527.1
142_1 61 years, female 525.7
317_1 60 years, male 525.0
518_1 75 years, female 517.5
288_1 66 years, female 516.6
466_1 57 years, female 515.2
501_1 88 years, male 514.6
319_1 81 years, male 508.8
109_1 81 years, female 508.3
468_1 89 years, male 507.6
499_1 55 years, female 506.5
349_1 83 years, male 504.8
42_1 85 years, male 504.0
217_1 76 years, male 503.6
18_1 88 years, male 502.8
32_1 67 years, male 500.2
335_1 73 years, female 499.0
320_1 89 years, female 498.9
354_1 81 years, female 495.9
314_1 67 years, male 489.6
89_1 63 years, male 489.2
316_1 62 years, male 484.4
324_1 76 years, male 483.7
351_1 91 years, male 483.7
115_1 83 years, male 482.6
313_1 79 years, female 481.2
177_1 74 years, male 478.4
251_1 78 years, male 475.7
425_1 59 years, female 473.1
264_1 73 years, female 470.8
172_1 72 years, female 470.7
291_1 76 years, male 470.7
81_1 67 years, male 467.4
353_1 82 years, female 460.2
295_1 61 years, female 458.6
318_1 68 years, male 453.8
350_1 84 years, female 453.5
352_1 62 years, male 449.4
406_1 79 years, male 444.9
480_1 63 years, male 444.8
286_1 68 years, female 441.4
503_1 68 years, male 437.3
9_1 66 years, female 429.8
517_1 88 years, male 429.1
149_1 88 years, male 420.8
43_1 64 years, female 415.0
506_1 65 years, male 414.3
293_1 68 years, female 401.2
163_1 78 years, male 399.8
356_1 87 years, female 398.5
292_1 71 years, male 392.7
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 18.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 18.2
FF:10030-101E3 24-65 years, mixed 18.2

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 201.9
Pig sample Sample description nTPM
Retina
nTPM: 202.0
Samples: 4

Max nTPM: 232.0
Min nTPM: 188.2
Sample A Female 188.2
Sample B Female 196.2
Sample C Male 232.0
Sample D Male 191.4

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 557.8
Mouse sample Sample description nTPM
Retina
nTPM: 557.8
Samples: 4

Max nTPM: 627.7
Min nTPM: 478.9
Sample A Male 557.4
Sample B Male 478.9
Sample C Female 627.7
Sample D Female 567.2

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.