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RPL6
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:788.0 nTPM
HPA:788.0 nTPM
GTEx:924.0 nTPM
FANTOM5:34.6 Scaled Tags Per Million
Pig:496.2 nTPM
Mouse:448.3 nTPM
Allen mouse:20.9 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 788.0
Sample id Sample description nTPM
Amygdala
nTPM: 788.0
2695 Female, age 67, right hemisphere 817.9
2517 Female, age 94, left hemisphere 799.9
2514 Male, age 75, right hemisphere 788.0
1987 Female, age 91, left hemisphere 774.9
2814 Male, age 76, right hemisphere 759.4
Basal amygdala
nTPM: 766.1
2827 Female, age 67, right hemisphere 795.4
2609 Male, age 75, right hemisphere 786.1
2685 Female, age 94, left hemisphere 768.2
2110 Male, age 80, left hemisphere 758.7
2243 Female, age 91, right hemisphere 756.2
1955 Male, age 76, both hemispheres 731.8
Central amygdala
nTPM: 776.4
2826 Female, age 94, left hemisphere 831.3
2515 Male, age 75, right hemisphere 799.3
2239 Male, age 80, left hemisphere 758.8
2701 Female, age 91, right hemisphere 755.5
1905 Male, age 76, both hemispheres 737.3
Corticomedial amygdala
nTPM: 771.6
2428 Male, age 75, right hemisphere 803.6
2535 Female, age 67, right hemisphere 784.9
2829 Male, age 80, left hemisphere 772.1
2429 Female, age 94, left hemisphere 766.3
2242 Female, age 91, right hemisphere 756.0
2240 Male, age 76, both hemispheres 747.0
Lateral amygdala
nTPM: 779.1
2830 Female, age 67, right hemisphere 837.0
2516 Male, age 75, right hemisphere 803.7
2534 Female, age 94, left hemisphere 799.0
2256 Male, age 80, left hemisphere 755.3
1883 Male, age 76, both hemispheres 745.6
2255 Female, age 91, right hemisphere 734.1
Stria terminalis, bed nucleus
nTPM: 741.4
1974 Female, age 91, both hemispheres 755.3
2201 Male, age 74, unknown 745.3
2486 Female, age 94, both hemispheres 723.7

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 924.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 924.0
Samples: 152

Max nTPM: 2470.4
Min nTPM: 447.9
Std nTPM: 304.7
Median nTPM: 867.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 2470.4
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 1973.8
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 1959.1
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 1950.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 1825.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1815.9
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1648.5
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 1427.2
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1396.6
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 1390.2
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 1357.0
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1341.3
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1320.9
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1283.3
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 1264.6
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1226.3
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 1222.7
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1217.3
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1204.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1196.9
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 1192.9
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1191.9
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1171.1
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1113.7
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1102.3
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 1094.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1093.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 1079.7
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1062.9
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1060.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1057.3
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1047.5
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1046.4
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1042.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1041.2
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1039.4
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1037.2
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1030.6
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1030.0
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1026.3
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1020.9
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 1019.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 1018.3
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 1014.4
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 1010.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1006.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1005.4
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 998.2
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 990.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 983.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 983.2
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 975.8
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 967.0
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 966.9
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 966.2
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 966.2
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 956.2
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 923.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 918.7
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 916.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 915.0
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 912.6
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 909.6
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 907.2
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 897.9
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 892.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 890.1
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 885.2
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 884.0
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 883.3
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 879.9
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 878.6
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 876.1
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 873.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 873.3
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 868.4
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 867.4
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 861.3
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 858.8
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 856.8
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 853.6
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 851.6
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 849.9
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 846.2
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 842.6
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 839.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 832.6
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 826.0
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 819.6
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 817.8
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 804.8
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 800.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 797.0
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 795.9
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 791.6
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 787.2
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 785.6
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 772.8
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 772.1
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 769.7
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 767.6
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 765.6
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 764.6
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 761.7
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 759.7
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 752.5
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 747.0
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 743.7
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 729.5
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 725.2
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 717.6
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 710.7
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 709.1
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 709.0
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 708.5
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 707.9
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 705.6
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 705.6
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 704.1
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 703.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 692.4
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 692.2
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 690.9
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 687.9
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 687.7
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 682.6
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 680.4
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 669.5
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 669.2
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 668.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 668.1
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 665.9
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 662.4
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 659.9
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 651.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 651.6
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 651.0
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 649.6
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 629.1
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 629.0
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 624.7
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 616.1
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 614.1
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 608.1
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 604.1
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 600.3
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 586.4
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 577.1
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 554.5
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 546.9
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 534.3
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 447.9
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 34.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 34.6
FF:10151-102I7 76 years, female 34.6

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 496.2
Pig sample Sample description nTPM
Amygdala
nTPM: 496.2
Samples: 4

Max nTPM: 589.9
Min nTPM: 323.5
Sample A Female 581.3
Sample B Female 589.9
Sample C Male 490.2
Sample D Male 323.5

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 448.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 448.3
Samples: 4

Max nTPM: 476.4
Min nTPM: 433.9
Sample A Male 444.6
Sample B Male 476.4
Sample C Female 438.1
Sample D Female 433.9

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 20.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 20.9
69818317 Antisense, RP_050510_04_H04, Mouse strain C57BL/6J (56 days, male) 20.9

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