HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:932.6 nTPM
HPA:932.6 nTPM
GTEx:734.3 nTPM
FANTOM5:710.7 Scaled Tags Per Million
Mouse:0.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008819Antibody CAB013493Antibody CAB080063
Glial cells HighMediumMedium
Neuronal cells LowHighMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 932.6
Sample id Sample description nTPM
Hippocampus
nTPM: 894.6
1898 Male, age 80, left hemisphere 959.4
2529 Female, age 94, left hemisphere 917.5
1911 Female, age 85, right hemisphere 878.5
2148 Female, age 91, left hemisphere 874.5
2621 Female, age 67, right hemisphere 874.4
1855 Male, age 76, left hemisphere 863.3
Dentate gyrus
nTPM: 903.3
2530 Female, age 94, left hemisphere 948.3
2528 Male, age 74, both hemispheres 938.0
1927 Female, age 91, both hemispheres 931.7
2010 Male, age 76, both hemispheres 903.7
2246 Female, age 85, both hemispheres 872.1
2531 Female, age 67, both hemispheres 826.3
Entorhinal gyrus
nTPM: 895.7
2764 Male, age 80, right hemisphere 952.7
1938 Female, age 85, left hemisphere 938.2
2117 Female, age 91, right hemisphere 908.4
1787 Male, age 76, left hemisphere 881.6
2613 Female, age 94, left hemisphere 871.6
2686 Male, age 75, right hemisphere 821.6
Hippocampus, CA1
nTPM: 932.6
2749 Male, age 80, left hemisphere 1097.3
2527 Male, age 74, both hemispheres 927.7
1873 Female, age 85, both hemispheres 922.4
2082 Female, age 91, right hemisphere 873.9
2045 Male, age 76, both hemispheres 841.9
Hippocampus, CA2
nTPM: 917.7
1963 Male, age 80, left hemisphere 975.1
2249 Male, age 74, both hemispheres 972.2
1892 Male, age 76, both hemispheres 927.3
2113 Female, age 91, right hemisphere 882.3
2437 Female, age 94, left hemisphere 877.9
1940 Female, age 85, left hemisphere 871.7
Hippocampus, CA3
nTPM: 903.8
2137 Male, age 80, left hemisphere 993.0
2436 Male, age 74, both hemispheres 954.2
2620 Female, age 94, left hemisphere 889.4
1867 Male, age 76, both hemispheres 888.1
1891 Female, age 85, both hemispheres 880.8
2861 Female, age 67, both hemispheres 817.6
Parahippocampal cortex
nTPM: 882.6
1850 Male, age 80, both hemispheres 938.7
1990 Female, age 91, right hemisphere 913.4
1933 Female, age 85, both hemispheres 913.3
2250 Female, age 67, right hemisphere 898.7
2245 Female, age 91, both hemispheres 894.8
2532 Female, age 72, left hemisphere 876.7
2018 Male, age 76, both hemispheres 870.7
2692 Male, age 74, both hemispheres 853.3
2693 Female, age 94, both hemispheres 839.0
2622 Female, age 67, right hemisphere 827.1
Perirhinal gyrus
nTPM: 916.8
1794 Male, age 80, right hemisphere 964.6
1847 Female, age 91, left hemisphere 955.5
1841 Female, age 85, right hemisphere 929.5
2521 Female, age 94, right hemisphere 870.5
2848 Male, age 76, right hemisphere 863.5
Subiculum
nTPM: 891.0
1901 Male, age 80, both hemispheres 921.5
1977 Female, age 85, both hemispheres 921.4
2619 Male, age 74, both hemispheres 885.1
2042 Male, age 76, both hemispheres 884.9
2729 Female, age 91, right hemisphere 883.1
2438 Female, age 94, left hemisphere 849.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 734.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 734.3
Samples: 197

Max nTPM: 1460.3
Min nTPM: 187.8
Std nTPM: 174.8
Median nTPM: 727.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1460.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1278.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 1177.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1176.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1140.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1110.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 1096.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1090.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 1063.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 1053.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 1036.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 710.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 710.7
FF:10169-103B7 60 years, female 907.1
FF:10153-102I9 76 years, female 514.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Male 0.2
Sample B Male 0.3
Sample C Female 0.0
Sample D Female 0.2
Hippocampal formation
nTPM: 0.3
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.2
Sample A Male 0.2
Sample B Male 0.4
Sample C Female 0.2
Sample D Female 0.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71919523 Antisense, RP_051012_02_E12, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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