HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:142.3 nTPM
HPA:142.3 nTPM
GTEx:256.0 nTPM
FANTOM5:180.5 Scaled Tags Per Million
Pig:62.0 nTPM
Mouse:243.6 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028968Antibody CAB004388
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 142.3
Sample id Sample description nTPM
Hippocampus
nTPM: 110.4
2621 Female, age 67, right hemisphere 137.2
1898 Male, age 80, left hemisphere 112.5
1855 Male, age 76, left hemisphere 111.3
2148 Female, age 91, left hemisphere 105.2
1911 Female, age 85, right hemisphere 102.7
2529 Female, age 94, left hemisphere 93.7
Dentate gyrus
nTPM: 142.3
2530 Female, age 94, left hemisphere 323.0
2528 Male, age 74, both hemispheres 118.9
1927 Female, age 91, both hemispheres 110.7
2010 Male, age 76, both hemispheres 104.5
2246 Female, age 85, both hemispheres 102.8
2531 Female, age 67, both hemispheres 94.1
Entorhinal gyrus
nTPM: 114.4
2613 Female, age 94, left hemisphere 151.3
1938 Female, age 85, left hemisphere 128.8
1787 Male, age 76, left hemisphere 112.0
2686 Male, age 75, right hemisphere 108.0
2764 Male, age 80, right hemisphere 106.4
2117 Female, age 91, right hemisphere 79.8
Hippocampus, CA1
nTPM: 106.8
2749 Male, age 80, left hemisphere 117.6
2527 Male, age 74, both hemispheres 116.2
1873 Female, age 85, both hemispheres 109.7
2082 Female, age 91, right hemisphere 100.5
2045 Male, age 76, both hemispheres 90.0
Hippocampus, CA2
nTPM: 117.8
2437 Female, age 94, left hemisphere 153.6
2249 Male, age 74, both hemispheres 138.1
1963 Male, age 80, left hemisphere 119.1
1940 Female, age 85, left hemisphere 102.3
1892 Male, age 76, both hemispheres 101.8
2113 Female, age 91, right hemisphere 92.1
Hippocampus, CA3
nTPM: 98.0
2861 Female, age 67, both hemispheres 131.0
1891 Female, age 85, both hemispheres 103.4
1867 Male, age 76, both hemispheres 100.9
2436 Male, age 74, both hemispheres 85.1
2620 Female, age 94, left hemisphere 84.4
2137 Male, age 80, left hemisphere 83.1
Parahippocampal cortex
nTPM: 124.9
2692 Male, age 74, both hemispheres 153.7
2250 Female, age 67, right hemisphere 140.4
2622 Female, age 67, right hemisphere 136.7
1990 Female, age 91, right hemisphere 134.4
1850 Male, age 80, both hemispheres 130.5
1933 Female, age 85, both hemispheres 118.1
2245 Female, age 91, both hemispheres 116.5
2532 Female, age 72, left hemisphere 114.2
2693 Female, age 94, both hemispheres 105.3
2018 Male, age 76, both hemispheres 99.0
Perirhinal gyrus
nTPM: 119.9
1847 Female, age 91, left hemisphere 153.4
1841 Female, age 85, right hemisphere 133.3
1794 Male, age 80, right hemisphere 108.5
2848 Male, age 76, right hemisphere 104.9
2521 Female, age 94, right hemisphere 99.7
Subiculum
nTPM: 109.3
2438 Female, age 94, left hemisphere 128.8
2619 Male, age 74, both hemispheres 118.8
1977 Female, age 85, both hemispheres 113.7
1901 Male, age 80, both hemispheres 112.5
2729 Female, age 91, right hemisphere 91.4
2042 Male, age 76, both hemispheres 90.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 256.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 256.0
Samples: 197

Max nTPM: 702.6
Min nTPM: 39.7
Std nTPM: 124.2
Median nTPM: 225.8
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 702.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 671.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 637.0
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 629.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 566.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 553.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 550.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 527.2
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 524.3
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 506.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 500.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 180.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 180.5
FF:10153-102I9 76 years, female 194.7
FF:10169-103B7 60 years, female 166.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 62.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.6
Samples: 4

Max nTPM: 65.5
Min nTPM: 36.8
Sample A Female 65.5
Sample B Female 40.8
Sample C Male 43.4
Sample D Male 36.8
Entorhinal cortex
nTPM: 62.0
Samples: 4

Max nTPM: 69.3
Min nTPM: 50.6
Sample A Female 50.6
Sample B Female 69.3
Sample C Male 62.8
Sample D Male 65.1
Subiculum
nTPM: 55.3
Samples: 4

Max nTPM: 76.5
Min nTPM: 43.6
Sample A Female 76.5
Sample B Female 52.4
Sample C Male 48.5
Sample D Male 43.6
Ventral hippocampus
nTPM: 43.4
Samples: 4

Max nTPM: 46.7
Min nTPM: 40.4
Sample A Female 46.7
Sample B Female 40.4
Sample C Male 44.0
Sample D Male 42.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 243.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 243.6
Samples: 4

Max nTPM: 302.1
Min nTPM: 191.1
Sample A Male 302.1
Sample B Male 253.6
Sample C Female 227.6
Sample D Female 191.1
Hippocampal formation
nTPM: 205.4
Samples: 4

Max nTPM: 255.6
Min nTPM: 170.8
Sample A Male 255.6
Sample B Male 193.5
Sample C Female 170.8
Sample D Female 201.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
69817952 Antisense, RP_050510_04_B01, Mouse strain C57BL/6J (56 days, male) 7.3
74749895 Antisense, RP_060220_04_F01, Mouse strain C57BL/6J (56 days, male) 6.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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