We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HNRNPC
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • HNRNPC
TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:295.2 nTPM
HPA:295.2 nTPM
GTEx:330.5 nTPM
FANTOM5:17.9 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 295.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 277.1
1981 Female, age 72, midline 300.4
2048 Male, age 55, midline 282.5
2565 Male, age 75, midline 281.5
2194 Female, age 79, both hemispheres 261.2
2816 Male, age 47, midline 259.7
Cervical spinal cord, dorsal horn
nTPM: 295.0
2296 Male, age 66, both hemispheres 322.2
2069 Male, age 47, both hemispheres 313.5
2173 Female, age 72, unknown 309.6
1877 Male, age 55, unknown 282.2
2297 Male, age 75, both hemispheres 279.5
2721 Male, age 90, both hemispheres 262.9
Cervical spinal cord, ventral horn
nTPM: 295.2
2480 Male, age 75, both hemispheres 322.0
2098 Female, age 72, unknown 319.6
2809 Male, age 90, both hemispheres 309.2
2295 Male, age 66, both hemispheres 298.8
2068 Male, age 55, unknown 275.6
2820 Female, age 79, both hemispheres 246.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 330.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 330.5
Samples: 159

Max nTPM: 498.5
Min nTPM: 201.5
Std nTPM: 54.6
Median nTPM: 334.0
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 498.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 469.8
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 454.5
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 448.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 439.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 433.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 432.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 422.3
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 421.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 414.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 404.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 403.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 402.3
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 398.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 397.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 392.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 392.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 390.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 386.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 386.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 385.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 385.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 385.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 385.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 384.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 384.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 382.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 382.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 382.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 373.6
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 373.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 372.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 369.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 368.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 368.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 368.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 367.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 366.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 366.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 365.8
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 365.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 363.7
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 362.2
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 361.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 361.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 361.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 361.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 361.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 360.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 359.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 358.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 357.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 357.8
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 354.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 354.1
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 352.7
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 352.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 350.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 349.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 348.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 347.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 347.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 346.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 345.8
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 345.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 345.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 345.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 344.9
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 344.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 344.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 343.9
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 342.1
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 341.3
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 340.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 338.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 335.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 334.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 334.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 334.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 334.0
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 333.9
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 330.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 330.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 329.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 328.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 327.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 325.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 324.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 323.5
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 322.6
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 321.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 321.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 319.3
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 319.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 319.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 317.9
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 317.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 315.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 315.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 315.6
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 312.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 310.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 309.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 308.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 308.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 307.0
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 305.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 304.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 303.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 302.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 302.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 302.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 299.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 297.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 297.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 295.2
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 294.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 294.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 293.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 292.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 292.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 292.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 291.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 291.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 285.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 284.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 283.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 283.2
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 281.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 280.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 280.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 279.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 278.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 278.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 277.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 271.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 271.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 269.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 269.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 268.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 268.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 267.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 264.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 261.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 260.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 259.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 257.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 254.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 244.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 242.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 233.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 227.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 223.8
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 221.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 220.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 216.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 208.6
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 205.8
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 201.5
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 17.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 17.9
FF:10181-103D1 60 years, female 22.8
FF:10159-103A6 76 years, female 13.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.