HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:96.2 nTPM
HPA:96.2 nTPM
GTEx:61.1 nTPM
FANTOM5:144.1 Scaled Tags Per Million
Pig:30.9 nTPM
Mouse:49.4 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021616Antibody CAB004035Antibody CAB047324Antibody CAB075739
Glial cells HighMediumMediumNot detected
Neuronal cells Not detectedNot detectedMediumNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.2
Sample id Sample description nTPM
Hippocampus
nTPM: 96.2
2529 Female, age 94, left hemisphere 107.1
1911 Female, age 85, right hemisphere 101.1
2148 Female, age 91, left hemisphere 97.4
1855 Male, age 76, left hemisphere 92.7
1898 Male, age 80, left hemisphere 91.8
2621 Female, age 67, right hemisphere 86.8
Dentate gyrus
nTPM: 89.4
2528 Male, age 74, both hemispheres 101.4
2010 Male, age 76, both hemispheres 95.7
2246 Female, age 85, both hemispheres 95.7
1927 Female, age 91, both hemispheres 83.7
2530 Female, age 94, left hemisphere 80.9
2531 Female, age 67, both hemispheres 79.1
Entorhinal gyrus
nTPM: 88.3
2117 Female, age 91, right hemisphere 112.6
1787 Male, age 76, left hemisphere 92.6
1938 Female, age 85, left hemisphere 90.4
2686 Male, age 75, right hemisphere 82.7
2764 Male, age 80, right hemisphere 77.9
2613 Female, age 94, left hemisphere 73.5
Hippocampus, CA1
nTPM: 91.7
2527 Male, age 74, both hemispheres 103.5
1873 Female, age 85, both hemispheres 94.7
2082 Female, age 91, right hemisphere 92.1
2045 Male, age 76, both hemispheres 87.9
2749 Male, age 80, left hemisphere 80.0
Hippocampus, CA2
nTPM: 90.9
1940 Female, age 85, left hemisphere 103.2
2249 Male, age 74, both hemispheres 100.5
2113 Female, age 91, right hemisphere 94.4
1963 Male, age 80, left hemisphere 87.8
2437 Female, age 94, left hemisphere 82.7
1892 Male, age 76, both hemispheres 76.9
Hippocampus, CA3
nTPM: 92.1
2436 Male, age 74, both hemispheres 124.3
1891 Female, age 85, both hemispheres 97.0
2861 Female, age 67, both hemispheres 84.8
2620 Female, age 94, left hemisphere 83.2
1867 Male, age 76, both hemispheres 82.6
2137 Male, age 80, left hemisphere 80.5
Parahippocampal cortex
nTPM: 87.7
2692 Male, age 74, both hemispheres 95.0
2018 Male, age 76, both hemispheres 92.7
2622 Female, age 67, right hemisphere 92.3
2250 Female, age 67, right hemisphere 92.1
2245 Female, age 91, both hemispheres 90.2
1933 Female, age 85, both hemispheres 89.9
1990 Female, age 91, right hemisphere 86.4
1850 Male, age 80, both hemispheres 80.1
2693 Female, age 94, both hemispheres 79.5
2532 Female, age 72, left hemisphere 78.4
Perirhinal gyrus
nTPM: 82.5
1841 Female, age 85, right hemisphere 84.9
2521 Female, age 94, right hemisphere 84.5
1794 Male, age 80, right hemisphere 83.7
1847 Female, age 91, left hemisphere 81.0
2848 Male, age 76, right hemisphere 78.3
Subiculum
nTPM: 91.1
2729 Female, age 91, right hemisphere 105.3
2619 Male, age 74, both hemispheres 99.5
2438 Female, age 94, left hemisphere 87.0
2042 Male, age 76, both hemispheres 86.5
1977 Female, age 85, both hemispheres 86.2
1901 Male, age 80, both hemispheres 82.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.1
Samples: 197

Max nTPM: 134.4
Min nTPM: 17.0
Std nTPM: 24.6
Median nTPM: 58.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 134.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 133.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 124.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 123.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 119.7
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 119.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 116.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 114.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 112.5
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 111.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 109.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 144.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 144.1
FF:10153-102I9 76 years, female 206.7
FF:10169-103B7 60 years, female 81.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.8
Samples: 4

Max nTPM: 36.3
Min nTPM: 21.5
Sample A Female 34.4
Sample B Female 23.1
Sample C Male 36.3
Sample D Male 21.5
Entorhinal cortex
nTPM: 25.1
Samples: 4

Max nTPM: 28.9
Min nTPM: 18.2
Sample A Female 28.9
Sample B Female 25.7
Sample C Male 27.5
Sample D Male 18.2
Subiculum
nTPM: 31.0
Samples: 4

Max nTPM: 38.6
Min nTPM: 26.2
Sample A Female 38.6
Sample B Female 28.6
Sample C Male 26.2
Sample D Male 30.4
Ventral hippocampus
nTPM: 29.5
Samples: 4

Max nTPM: 38.7
Min nTPM: 23.8
Sample A Female 28.3
Sample B Female 23.8
Sample C Male 38.7
Sample D Male 27.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.3
Samples: 4

Max nTPM: 45.8
Min nTPM: 34.1
Sample A Male 42.0
Sample B Male 35.1
Sample C Female 45.8
Sample D Female 34.1
Hippocampal formation
nTPM: 49.4
Samples: 4

Max nTPM: 63.2
Min nTPM: 37.2
Sample A Male 37.2
Sample B Male 41.4
Sample C Female 55.7
Sample D Female 63.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
2716 Antisense, RP_Baylor_103103, Mouse strain C57BL/6J (56 days, male) 0.4
2715 Antisense, RP_Baylor_103103, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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