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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM EPIDIDYMIS
ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:98.6 nTPM
GTEx:98.6 nTPM
FANTOM5:77.9 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA021616Antibody CAB004035Antibody CAB075739
Squamous epithelial cells MediumLowNot detected





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 98.6
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 98.6
Samples: 156

Max nTPM: 415.0
Min nTPM: 6.5
Std nTPM: 68.9
Median nTPM: 87.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 415.0
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 370.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 260.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 249.4
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 232.8
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 232.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 231.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 230.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 207.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 207.0
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 202.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 197.9
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 197.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 196.7
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 190.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 189.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 184.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 181.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 180.3
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 175.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 172.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 172.2
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 172.1
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 170.8
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 163.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 162.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 159.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 157.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 157.7
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 156.9
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 155.5
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 152.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 152.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 152.2
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 147.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 147.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 144.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 139.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 138.8
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 137.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 134.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 132.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 131.3
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 127.2
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 127.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 125.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 124.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 124.1
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 122.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 120.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 118.6
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 116.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 116.0
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 114.6
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 114.4
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 114.1
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 114.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 113.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 112.6
GTEX-1C475-0526-SM-793AC 40-49 years, female 111.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 109.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 107.0
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 106.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 105.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 104.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 102.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 99.2
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 99.2
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 97.5
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 96.2
GTEX-QCQG-1226-SM-48U23 50-59 years, female 96.2
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 95.5
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 94.2
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 94.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 91.4
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 89.1
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 89.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 88.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 87.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 85.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 85.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 84.9
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 84.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 84.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 84.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 82.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 82.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 82.1
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 80.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 78.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 76.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 71.2
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 71.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 70.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 70.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 69.8
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 69.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 66.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 65.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 63.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 63.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 62.4
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 58.6
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 54.9
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 54.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 54.7
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 52.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 52.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 48.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 47.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 46.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 44.6
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 43.1
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 42.9
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 42.8
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 42.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 42.1
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 41.3
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 37.5
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 36.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 36.1
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 35.2
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 35.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 33.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 33.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 33.3
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 31.5
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 31.3
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 31.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 30.9
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 30.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 30.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 30.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 29.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 29.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 28.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 27.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 26.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 26.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 25.2
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 25.1
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 24.2
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 23.7
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 22.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 21.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 18.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 18.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 17.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 16.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 15.5
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 14.9
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 14.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 11.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 10.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 9.0
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 6.5
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 77.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 77.9
FF:10204-103F6 68 years, female 77.9

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