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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1685.0 nTPM
GTEx:1685.0 nTPM
FANTOM5:870.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA046859Antibody HPA063034
Squamous epithelial cells Not detectedLow




VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1685.0
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1685.0
Samples: 156

Max nTPM: 4203.8
Min nTPM: 772.7
Std nTPM: 735.7
Median nTPM: 1475.3
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 4203.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 4194.7
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 4154.3
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 3907.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 3904.8
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 3661.9
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 3634.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 3623.1
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 3383.8
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 3361.8
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 3320.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2776.7
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 2741.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 2687.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 2680.5
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 2627.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 2611.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 2581.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 2490.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 2477.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 2405.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2378.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 2373.1
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 2346.4
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 2310.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 2273.0
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 2211.2
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 2199.3
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 2195.8
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 2169.4
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 2162.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 2125.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 2125.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 2109.5
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 2108.6
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2061.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2003.4
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 1970.4
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1968.9
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1921.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 1915.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1914.5
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 1909.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1865.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1859.0
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1854.8
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1821.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1806.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1793.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1725.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 1701.7
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1685.0
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 1680.0
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1679.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 1668.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1645.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 1611.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 1607.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1605.3
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1603.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1600.7
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 1579.0
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1568.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 1565.8
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1557.0
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 1548.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 1539.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 1538.7
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1532.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1522.9
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1522.3
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1509.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1502.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1499.9
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1494.6
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1488.3
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1484.1
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1481.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1468.8
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1464.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1448.3
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1440.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1438.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1438.0
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 1436.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 1428.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1404.3
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 1377.1
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1364.1
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1345.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1344.2
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 1327.8
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1309.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1308.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1295.3
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1292.5
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 1285.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1283.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1279.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1279.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 1275.8
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1249.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1247.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1245.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1240.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1239.6
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1236.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 1235.3
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1230.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 1227.0
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1223.1
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1216.3
GTEX-11I78-2026-SM-5987C 50-59 years, female 1212.1
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1207.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 1200.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1199.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1183.1
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1176.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 1173.9
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1170.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1168.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 1167.5
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1165.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1156.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1151.3
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 1146.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1117.3
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1116.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1102.4
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 1094.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1093.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1093.5
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1091.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 1086.8
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1080.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 1078.7
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1075.3
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1074.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 1068.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1068.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1063.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1059.0
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1045.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1042.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1025.3
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1016.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 991.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 982.7
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 978.4
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 945.0
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 940.9
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 895.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 878.5
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 823.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 818.3
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 772.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 870.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 870.7
FF:10204-103F6 68 years, female 870.7

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.