HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:276.1 nTPM
HPA:276.1 nTPM
GTEx:173.1 nTPM
FANTOM5:1006.5 Scaled Tags Per Million
Pig:488.4 nTPM
Mouse:56.7 nTPM
Allen mouse:14.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002381Antibody CAB018719
Glial cells HighMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 276.1
Sample id Sample description nTPM
Hippocampus
nTPM: 215.9
1898 Male, age 80, left hemisphere 253.5
2529 Female, age 94, left hemisphere 248.5
2148 Female, age 91, left hemisphere 228.5
1911 Female, age 85, right hemisphere 200.3
2621 Female, age 67, right hemisphere 188.4
1855 Male, age 76, left hemisphere 176.3
Dentate gyrus
nTPM: 211.3
2530 Female, age 94, left hemisphere 299.1
2528 Male, age 74, both hemispheres 244.3
2010 Male, age 76, both hemispheres 219.5
2246 Female, age 85, both hemispheres 189.6
1927 Female, age 91, both hemispheres 179.5
2531 Female, age 67, both hemispheres 135.9
Entorhinal gyrus
nTPM: 276.1
2117 Female, age 91, right hemisphere 386.5
2764 Male, age 80, right hemisphere 348.0
1938 Female, age 85, left hemisphere 270.9
1787 Male, age 76, left hemisphere 241.3
2613 Female, age 94, left hemisphere 234.9
2686 Male, age 75, right hemisphere 175.2
Hippocampus, CA1
nTPM: 202.8
2749 Male, age 80, left hemisphere 245.7
2527 Male, age 74, both hemispheres 234.5
1873 Female, age 85, both hemispheres 213.4
2082 Female, age 91, right hemisphere 191.0
2045 Male, age 76, both hemispheres 129.4
Hippocampus, CA2
nTPM: 234.1
1963 Male, age 80, left hemisphere 282.7
2249 Male, age 74, both hemispheres 278.4
2437 Female, age 94, left hemisphere 226.4
2113 Female, age 91, right hemisphere 222.4
1940 Female, age 85, left hemisphere 207.0
1892 Male, age 76, both hemispheres 187.6
Hippocampus, CA3
nTPM: 175.9
1891 Female, age 85, both hemispheres 233.7
2620 Female, age 94, left hemisphere 190.7
2137 Male, age 80, left hemisphere 186.8
1867 Male, age 76, both hemispheres 174.6
2436 Male, age 74, both hemispheres 153.6
2861 Female, age 67, both hemispheres 115.8
Parahippocampal cortex
nTPM: 224.9
1850 Male, age 80, both hemispheres 280.4
1990 Female, age 91, right hemisphere 278.3
2532 Female, age 72, left hemisphere 274.7
1933 Female, age 85, both hemispheres 235.1
2245 Female, age 91, both hemispheres 231.7
2692 Male, age 74, both hemispheres 228.5
2250 Female, age 67, right hemisphere 223.1
2018 Male, age 76, both hemispheres 187.6
2693 Female, age 94, both hemispheres 155.8
2622 Female, age 67, right hemisphere 153.6
Perirhinal gyrus
nTPM: 244.7
1794 Male, age 80, right hemisphere 281.2
1847 Female, age 91, left hemisphere 268.0
1841 Female, age 85, right hemisphere 245.1
2521 Female, age 94, right hemisphere 222.6
2848 Male, age 76, right hemisphere 206.6
Subiculum
nTPM: 252.5
1977 Female, age 85, both hemispheres 296.6
2619 Male, age 74, both hemispheres 271.0
1901 Male, age 80, both hemispheres 256.8
2438 Female, age 94, left hemisphere 235.0
2729 Female, age 91, right hemisphere 231.6
2042 Male, age 76, both hemispheres 224.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 173.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 173.1
Samples: 197

Max nTPM: 296.3
Min nTPM: 61.1
Std nTPM: 38.6
Median nTPM: 169.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 296.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 283.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 270.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 266.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 265.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 263.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 257.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 254.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 245.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 241.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 236.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1006.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1006.5
FF:10153-102I9 76 years, female 1014.9
FF:10169-103B7 60 years, female 998.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 488.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 488.4
Samples: 4

Max nTPM: 651.7
Min nTPM: 283.8
Sample A Female 651.7
Sample B Female 473.3
Sample C Male 544.7
Sample D Male 283.8
Entorhinal cortex
nTPM: 371.1
Samples: 4

Max nTPM: 389.4
Min nTPM: 345.3
Sample A Female 385.1
Sample B Female 364.7
Sample C Male 389.4
Sample D Male 345.3
Subiculum
nTPM: 423.0
Samples: 4

Max nTPM: 524.7
Min nTPM: 359.1
Sample A Female 524.7
Sample B Female 401.1
Sample C Male 406.9
Sample D Male 359.1
Ventral hippocampus
nTPM: 433.0
Samples: 4

Max nTPM: 523.6
Min nTPM: 302.6
Sample A Female 446.8
Sample B Female 302.6
Sample C Male 523.6
Sample D Male 459.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.7
Samples: 4

Max nTPM: 67.8
Min nTPM: 48.9
Sample A Male 57.8
Sample B Male 52.4
Sample C Female 48.9
Sample D Female 67.8
Hippocampal formation
nTPM: 51.6
Samples: 4

Max nTPM: 58.4
Min nTPM: 45.6
Sample A Male 47.9
Sample B Male 54.3
Sample C Female 58.4
Sample D Female 45.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.6
74510104 Antisense, RP_060208_01_A08, Mouse strain C57BL/6J (56 days, male) 14.6

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