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TISSUE PRIMARY DATA MEDULLA OBLONGATA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
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VALIDATION
Dictionary
Tissue proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:362.4 nTPM
HPA:362.4 nTPM
FANTOM5:880.9 Scaled Tags Per Million
Pig:577.3 nTPM
Allen mouse:13.1 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 362.4
Sample id Sample description nTPM
Area postrema
nTPM: 269.9
2799 Male, age 61, both hemispheres 376.2
2306 Male, age 80, both hemispheres 286.1
2054 Male, age 76, both hemispheres 147.3
Cuneate nuclei
nTPM: 227.6
2131 Male, age 76, both hemispheres 237.0
2381 Male, age 80, both hemispheres 228.5
2376 Male, age 61, both hemispheres 217.2
Dorsal medullary reticular nucleus
nTPM: 255.0
2040 Female, age 85, both hemispheres 353.0
2373 Male, age 61, both hemispheres 213.8
2088 Male, age 76, both hemispheres 198.2
Dorsal motor vagal complex
nTPM: 199.2
2000 Male, age 74, unknown 269.3
2133 Female, age 91, both hemispheres 229.5
2844 Male, age 55, unknown 221.5
2185 Male, age 76, both hemispheres 209.1
2797 Male, age 61, both hemispheres 207.3
2643 Male, age 74, both hemispheres 184.6
2813 Female, age 72, unknown 159.2
2807 Female, age 85, both hemispheres 113.1
Gigantocellular reticular nuclei, medullary
nTPM: 278.7
2462 Male, age 74, both hemispheres 312.2
1876 Female, age 85, both hemispheres 309.7
2314 Male, age 61, both hemispheres 304.2
2387 Female, age 91, both hemispheres 277.8
2310 Male, age 80, both hemispheres 256.4
2022 Male, age 76, right hemisphere 211.8
Gigantocellular reticular nuclei, pars
nTPM: 281.3
2168 Male, age 76, both hemispheres 358.8
2084 Female, age 85, both hemispheres 296.7
2336 Male, age 61, both hemispheres 271.0
2330 Male, age 80, both hemispheres 261.1
2706 Male, age 80, both hemispheres 218.8
Inferior olive
nTPM: 283.2
2563 Male, age 74, both hemispheres 355.1
2085 Female, age 85, both hemispheres 323.8
2178 Male, age 61, both hemispheres 269.9
2628 Female, age 91, both hemispheres 257.4
2379 Male, age 80, both hemispheres 209.9
Lateral medullary reticular nucleus
nTPM: 297.5
2305 Male, age 74, both hemispheres 397.6
2852 Male, age 80, both hemispheres 322.7
2044 Male, age 76, both hemispheres 307.4
2190 Female, age 85, both hemispheres 274.3
2374 Male, age 61, both hemispheres 254.5
2804 Female, age 91, both hemispheres 228.5
Medial vestibular nucleus
nTPM: 277.5
2801 Male, age 74, both hemispheres 326.9
2093 Male, age 80, both hemispheres 293.1
2803 Female, age 91, both hemispheres 285.2
2624 Male, age 61, both hemispheres 276.7
2743 Female, age 85, both hemispheres 246.9
2134 Male, age 76, both hemispheres 236.3
Motor hypoglossal nucleus
nTPM: 257.3
2132 Female, age 85, both hemispheres 321.3
2125 Female, age 91, both hemispheres 316.2
2182 Male, age 80, both hemispheres 271.5
2461 Male, age 61, both hemispheres 234.4
2277 Male, age 76, both hemispheres 143.2
Nucleus ambiguus
nTPM: 362.4
2071 Male, age 76, both hemispheres 381.5
2096 Female, age 85, both hemispheres 343.4
Nucleus cuneatus
nTPM: 248.1
2100 Male, age 76, both hemispheres 311.3
2808 Female, age 85, both hemispheres 294.2
2564 Male, age 74, both hemispheres 284.2
2380 Male, age 80, both hemispheres 256.4
2562 Male, age 61, both hemispheres 203.7
2805 Female, age 91, both hemispheres 138.6
Nucleus gracilis
nTPM: 281.6
2627 Male, age 74, both hemispheres 324.1
2382 Male, age 80, both hemispheres 294.3
2299 Female, age 85, both hemispheres 226.5
Nucleus raphe magnus
nTPM: 340.0
2160 Male, age 61, both hemispheres 450.1
2455 Male, age 74, both hemispheres 364.6
2172 Female, age 85, both hemispheres 334.9
2051 Male, age 76, both hemispheres 310.5
2328 Male, age 80, both hemispheres 306.8
2459 Female, age 91, both hemispheres 273.2
Nucleus raphe obscurus
nTPM: 330.0
2845 Female, age 85, midline 380.5
2142 Male, age 76, midline 337.2
2800 Male, age 61, midline 272.2
Nucleus raphe pallidus
nTPM: 343.0
1924 Male, age 61, midline 380.8
2145 Male, age 76, midline 352.5
2183 Male, age 80, midline 295.6
Nucleus tractus solitarii
nTPM: 125.7
2656 Male, age 76, both hemispheres 158.9
2307 Male, age 80, both hemispheres 117.9
2144 Female, age 91, right hemisphere 116.0
2191 Female, age 85, both hemispheres 110.0
Parvicellular reticular nuclei
nTPM: 285.8
2119 Male, age 80, both hemispheres 304.4
2095 Male, age 76, both hemispheres 299.9
2558 Male, age 74, both hemispheres 253.2
Parvicellular reticular nuclei, medullary
nTPM: 272.4
2189 Female, age 91, both hemispheres 283.0
2091 Female, age 85, both hemispheres 277.8
2181 Male, age 80, left hemisphere 256.3
Peritrigeminal nucleus
nTPM: 328.9
2067 Female, age 85, both hemispheres 348.5
2136 Male, age 76, both hemispheres 328.0
2179 Male, age 61, both hemispheres 310.3
Prepositus hypoglossal nucleus
nTPM: 267.2
2855 Female, age 85, right hemisphere 313.7
2086 Male, age 80, both hemispheres 220.7
Spinal trigeminal nucleus, caudal
nTPM: 263.1
2447 Male, age 76, both hemispheres 303.0
2390 Female, age 91, both hemispheres 284.0
2312 Male, age 61, both hemispheres 268.9
2308 Male, age 80, both hemispheres 249.2
2642 Male, age 74, both hemispheres 210.1
Spinal trigeminal nucleus, interpolar
nTPM: 275.5
2066 Male, age 76, right hemisphere 330.7
2625 Male, age 61, both hemispheres 308.5
2389 Female, age 91, both hemispheres 251.0
2033 Male, age 80, both hemispheres 248.4
2386 Female, age 85, both hemispheres 238.9
Spinal vestibular nucleus
nTPM: 276.5
2748 Male, age 76, both hemispheres 320.3
2186 Female, age 91, both hemispheres 290.3
2806 Female, age 85, both hemispheres 286.4
2780 Male, age 80, both hemispheres 269.8
2384 Male, age 74, both hemispheres 266.1
2796 Male, age 61, both hemispheres 226.3
Ventral medullary reticular nucleus
nTPM: 258.7
2060 Male, age 76, both hemispheres 291.6
2372 Male, age 61, both hemispheres 225.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 275.7
1986 Male, age 76, both hemispheres 308.3
2741 Female, age 85, both hemispheres 280.7
2118 Male, age 80, both hemispheres 270.2
2180 Male, age 61, both hemispheres 269.3
2302 Female, age 91, both hemispheres 250.2

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 880.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 880.9
FF:10174-103C3 60 years, female 959.2
FF:10038-101F2 18-64 years, mixed 874.7
FF:10155-103A2 76 years, female 808.9

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 577.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 577.3
Samples: 4

Max nTPM: 638.2
Min nTPM: 509.4
Sample A Female 584.4
Sample B Female 509.4
Sample C Male 638.2
Sample D Male 577.1

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 13.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.1
74510104 Antisense, RP_060208_01_A08, Mouse strain C57BL/6J (56 days, male) 13.1

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.