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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:66.9 nTPM
FANTOM5:51.6 Scaled Tags Per Million
Pig:44.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA025735Antibody HPA025762
Glial cells MediumLow
Neuronal cells HighHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 66.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 66.9
Samples: 246

Max nTPM: 169.8
Min nTPM: 14.6
Std nTPM: 34.3
Median nTPM: 64.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 169.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 165.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 150.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 144.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 144.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 139.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 137.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 132.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 126.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 125.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 125.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 124.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 124.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 122.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 121.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 120.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 118.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 118.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 118.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 118.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 117.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 116.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 115.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 115.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 114.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 114.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 113.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 112.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 111.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 111.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 111.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 110.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 110.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 109.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 108.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 107.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 107.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 106.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 104.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 104.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 104.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 103.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 101.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 101.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 100.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 100.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 100.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 100.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 99.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 99.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 98.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 97.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 97.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 96.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 95.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 95.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 94.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 92.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 92.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 92.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 91.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 91.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 91.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 90.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 90.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 89.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 89.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 88.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 88.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 88.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 84.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 84.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 84.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 84.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 84.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 84.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 83.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 83.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 83.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 82.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 82.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 80.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 79.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 79.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 79.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 78.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 78.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 78.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 77.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 77.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 77.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 77.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 77.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 76.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 76.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 75.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 75.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 74.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 74.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 74.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 73.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 73.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 72.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 72.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 72.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 72.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 72.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 71.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 71.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 71.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 70.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 70.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 69.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 69.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 69.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 68.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 67.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 66.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 66.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 66.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 66.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 64.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 64.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 64.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 63.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 63.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 63.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 63.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 62.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 62.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 62.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 61.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 60.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 59.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 59.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 59.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 59.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 58.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 58.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 57.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 57.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 57.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 57.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 57.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 56.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 56.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 55.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 55.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 55.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 55.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 54.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 54.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 53.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 53.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 52.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 51.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 50.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 50.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 50.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 49.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 48.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 46.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 46.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 46.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 45.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 45.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 44.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 44.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 44.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 41.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 40.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 40.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 40.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 39.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 39.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 39.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 38.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 38.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 38.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 37.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 37.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 36.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 36.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 36.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 35.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 35.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 35.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 34.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 34.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 33.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 33.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 33.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 32.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 32.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 32.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 31.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 31.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 31.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 30.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 30.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 30.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 28.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 28.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 27.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 27.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 27.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 27.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 26.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 26.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 25.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 25.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 25.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 25.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 24.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 24.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 23.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 23.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 23.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 22.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 22.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 22.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 22.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 21.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 21.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 20.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 20.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 20.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 20.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 20.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 19.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 19.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 19.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 19.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 18.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 18.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 18.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 18.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 17.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 17.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 17.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 17.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 17.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 15.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 14.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 14.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 51.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 51.6
FF:10164-103B2 76 years, female 51.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 44.5
Pig sample Sample description nTPM
Caudate
nTPM: 44.5
Samples: 4

Max nTPM: 54.8
Min nTPM: 32.6
Sample A Female 32.6
Sample B Female 45.8
Sample C Male 54.8
Sample D Male 44.7

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