HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:16.8 nTPM
HPA:16.8 nTPM
GTEx:27.1 nTPM
FANTOM5:6.7 Scaled Tags Per Million
Pig:13.6 nTPM
Mouse:23.5 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.8
Sample id Sample description nTPM
Hippocampus
nTPM: 16.1
2621 Female, age 67, right hemisphere 25.1
2529 Female, age 94, left hemisphere 16.8
1911 Female, age 85, right hemisphere 16.7
2148 Female, age 91, left hemisphere 15.0
1898 Male, age 80, left hemisphere 12.7
1855 Male, age 76, left hemisphere 10.3
Dentate gyrus
nTPM: 14.2
1927 Female, age 91, both hemispheres 19.9
2531 Female, age 67, both hemispheres 19.4
2530 Female, age 94, left hemisphere 15.2
2528 Male, age 74, both hemispheres 12.4
2246 Female, age 85, both hemispheres 11.2
2010 Male, age 76, both hemispheres 7.2
Entorhinal gyrus
nTPM: 16.4
2613 Female, age 94, left hemisphere 28.0
2686 Male, age 75, right hemisphere 16.9
1787 Male, age 76, left hemisphere 16.1
2764 Male, age 80, right hemisphere 15.5
1938 Female, age 85, left hemisphere 12.3
2117 Female, age 91, right hemisphere 9.8
Hippocampus, CA1
nTPM: 13.5
2749 Male, age 80, left hemisphere 19.5
2527 Male, age 74, both hemispheres 15.7
2082 Female, age 91, right hemisphere 12.8
1873 Female, age 85, both hemispheres 11.3
2045 Male, age 76, both hemispheres 8.1
Hippocampus, CA2
nTPM: 14.6
1892 Male, age 76, both hemispheres 18.6
1963 Male, age 80, left hemisphere 17.6
2113 Female, age 91, right hemisphere 16.1
2437 Female, age 94, left hemisphere 15.8
1940 Female, age 85, left hemisphere 10.7
2249 Male, age 74, both hemispheres 8.9
Hippocampus, CA3
nTPM: 16.8
2861 Female, age 67, both hemispheres 27.7
2137 Male, age 80, left hemisphere 22.2
2620 Female, age 94, left hemisphere 16.9
1867 Male, age 76, both hemispheres 12.8
1891 Female, age 85, both hemispheres 11.1
2436 Male, age 74, both hemispheres 10.3
Parahippocampal cortex
nTPM: 16.5
2245 Female, age 91, both hemispheres 24.9
2622 Female, age 67, right hemisphere 24.5
2250 Female, age 67, right hemisphere 17.8
2692 Male, age 74, both hemispheres 15.7
2532 Female, age 72, left hemisphere 14.9
1933 Female, age 85, both hemispheres 14.6
2693 Female, age 94, both hemispheres 14.6
1990 Female, age 91, right hemisphere 14.0
1850 Male, age 80, both hemispheres 12.0
2018 Male, age 76, both hemispheres 11.7
Perirhinal gyrus
nTPM: 14.8
2521 Female, age 94, right hemisphere 19.1
1847 Female, age 91, left hemisphere 17.8
1794 Male, age 80, right hemisphere 13.3
2848 Male, age 76, right hemisphere 12.9
1841 Female, age 85, right hemisphere 11.0
Subiculum
nTPM: 11.3
2619 Male, age 74, both hemispheres 14.9
1901 Male, age 80, both hemispheres 14.3
1977 Female, age 85, both hemispheres 11.3
2438 Female, age 94, left hemisphere 9.6
2729 Female, age 91, right hemisphere 9.5
2042 Male, age 76, both hemispheres 8.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.1
Samples: 197

Max nTPM: 100.4
Min nTPM: 3.9
Std nTPM: 14.1
Median nTPM: 24.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 100.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 71.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 66.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 63.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 63.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 60.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 58.1
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 56.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 56.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 56.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 55.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.7
FF:10153-102I9 76 years, female 9.2
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.9
Samples: 4

Max nTPM: 9.7
Min nTPM: 7.2
Sample A Female 9.7
Sample B Female 9.4
Sample C Male 9.3
Sample D Male 7.2
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 16.4
Min nTPM: 12.6
Sample A Female 12.6
Sample B Female 12.7
Sample C Male 16.4
Sample D Male 12.7
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 15.4
Min nTPM: 10.3
Sample A Female 15.4
Sample B Female 10.9
Sample C Male 11.2
Sample D Male 10.3
Ventral hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.2
Sample A Female 9.3
Sample B Female 8.2
Sample C Male 12.7
Sample D Male 10.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 25.5
Min nTPM: 21.9
Sample A Male 22.4
Sample B Male 25.5
Sample C Female 21.9
Sample D Female 24.4
Hippocampal formation
nTPM: 19.7
Samples: 4

Max nTPM: 22.5
Min nTPM: 17.0
Sample A Male 17.0
Sample B Male 19.3
Sample C Female 19.8
Sample D Female 22.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
68845203 Antisense, RP_050224_01_C09, Mouse strain C57BL/6J (56 days, male) 3.3

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The Human Protein Atlas

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