HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:162.7 nTPM
HPA:162.7 nTPM
GTEx:243.0 nTPM
FANTOM5:317.0 Scaled Tags Per Million
Mouse:87.0 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 162.7
Sample id Sample description nTPM
Hippocampus
nTPM: 152.5
1898 Male, age 80, left hemisphere 160.8
1911 Female, age 85, right hemisphere 157.7
2148 Female, age 91, left hemisphere 155.3
2529 Female, age 94, left hemisphere 148.3
2621 Female, age 67, right hemisphere 147.1
1855 Male, age 76, left hemisphere 145.5
Dentate gyrus
nTPM: 152.7
2530 Female, age 94, left hemisphere 166.0
2528 Male, age 74, both hemispheres 153.5
2531 Female, age 67, both hemispheres 151.1
1927 Female, age 91, both hemispheres 150.6
2010 Male, age 76, both hemispheres 148.8
2246 Female, age 85, both hemispheres 146.1
Entorhinal gyrus
nTPM: 162.7
2764 Male, age 80, right hemisphere 174.8
2686 Male, age 75, right hemisphere 172.5
1938 Female, age 85, left hemisphere 165.5
2117 Female, age 91, right hemisphere 157.2
2613 Female, age 94, left hemisphere 155.7
1787 Male, age 76, left hemisphere 150.8
Hippocampus, CA1
nTPM: 160.4
2045 Male, age 76, both hemispheres 165.1
1873 Female, age 85, both hemispheres 164.5
2749 Male, age 80, left hemisphere 162.7
2082 Female, age 91, right hemisphere 156.0
2527 Male, age 74, both hemispheres 153.7
Hippocampus, CA2
nTPM: 157.7
1963 Male, age 80, left hemisphere 165.3
1892 Male, age 76, both hemispheres 163.4
2113 Female, age 91, right hemisphere 158.2
2249 Male, age 74, both hemispheres 157.4
2437 Female, age 94, left hemisphere 155.7
1940 Female, age 85, left hemisphere 146.2
Hippocampus, CA3
nTPM: 154.1
1867 Male, age 76, both hemispheres 167.1
2137 Male, age 80, left hemisphere 159.8
1891 Female, age 85, both hemispheres 157.5
2861 Female, age 67, both hemispheres 149.8
2620 Female, age 94, left hemisphere 145.6
2436 Male, age 74, both hemispheres 144.8
Parahippocampal cortex
nTPM: 157.6
1850 Male, age 80, both hemispheres 167.1
2692 Male, age 74, both hemispheres 166.1
1933 Female, age 85, both hemispheres 161.1
2245 Female, age 91, both hemispheres 157.6
2622 Female, age 67, right hemisphere 157.1
2250 Female, age 67, right hemisphere 155.5
1990 Female, age 91, right hemisphere 155.4
2018 Male, age 76, both hemispheres 154.3
2693 Female, age 94, both hemispheres 154.3
2532 Female, age 72, left hemisphere 147.9
Perirhinal gyrus
nTPM: 161.5
1794 Male, age 80, right hemisphere 176.3
1841 Female, age 85, right hemisphere 168.5
1847 Female, age 91, left hemisphere 159.6
2848 Male, age 76, right hemisphere 155.3
2521 Female, age 94, right hemisphere 147.5
Subiculum
nTPM: 154.9
1977 Female, age 85, both hemispheres 161.4
1901 Male, age 80, both hemispheres 160.4
2619 Male, age 74, both hemispheres 155.4
2042 Male, age 76, both hemispheres 152.3
2729 Female, age 91, right hemisphere 151.3
2438 Female, age 94, left hemisphere 148.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 243.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 243.0
Samples: 197

Max nTPM: 553.9
Min nTPM: 42.3
Std nTPM: 77.8
Median nTPM: 239.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 553.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 454.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 440.6
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 435.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 433.1
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 414.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 391.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 391.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 388.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 386.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 382.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 317.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 317.0
FF:10169-103B7 60 years, female 410.1
FF:10153-102I9 76 years, female 223.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.0
Samples: 4

Max nTPM: 97.3
Min nTPM: 74.8
Sample A Male 97.3
Sample B Male 92.8
Sample C Female 74.8
Sample D Female 83.0
Hippocampal formation
nTPM: 74.2
Samples: 4

Max nTPM: 99.3
Min nTPM: 58.4
Sample A Male 99.3
Sample B Male 73.6
Sample C Female 58.4
Sample D Female 65.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
69548958 Antisense, RP_050426_02_F05, Mouse strain C57BL/6J (56 days, male) 3.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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