PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:99.2 nTPM
HPA:99.2 nTPM
FANTOM5:460.6 Scaled Tags Per Million
Pig:273.4 nTPM
Mouse:263.2 nTPM
Allen mouse:12.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 99.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 67.5
1984 Male, age 76, both hemispheres 84.9
2301 Female, age 85, both hemispheres 78.7
2188 Female, age 91, both hemispheres 57.8
2090 Male, age 80, both hemispheres 48.7
Area postrema
nTPM: 55.9
2799 Male, age 61, both hemispheres 57.1
2306 Male, age 80, both hemispheres 56.3
2054 Male, age 76, both hemispheres 54.2
Cuneate nuclei
nTPM: 80.0
2131 Male, age 76, both hemispheres 119.0
2376 Male, age 61, both hemispheres 68.6
2381 Male, age 80, both hemispheres 52.3
Dorsal cochlear nucleus
nTPM: 68.1
2802 Male, age 74, right hemisphere 78.4
2370 Male, age 61, both hemispheres 76.9
2187 Female, age 91, both hemispheres 64.5
2058 Male, age 76, both hemispheres 63.3
2378 Male, age 80, both hemispheres 57.3
Dorsal medullary reticular nucleus
nTPM: 75.6
2088 Male, age 76, both hemispheres 82.5
2040 Female, age 85, both hemispheres 75.7
2373 Male, age 61, both hemispheres 68.7
Dorsal motor vagal complex
nTPM: 71.5
2133 Female, age 91, both hemispheres 97.9
2797 Male, age 61, both hemispheres 85.7
2185 Male, age 76, both hemispheres 83.4
2844 Male, age 55, unknown 82.1
2000 Male, age 74, unknown 80.0
2643 Male, age 74, both hemispheres 63.0
2813 Female, age 72, unknown 40.1
2807 Female, age 85, both hemispheres 39.7
Dorsal tegmental nucleus
nTPM: 64.2
2083 Male, age 80, both hemispheres 84.0
1936 Male, age 76, left hemisphere 65.2
2326 Male, age 74, both hemispheres 57.2
2358 Male, age 61, both hemispheres 50.4
Dorsolateral tegmental area
nTPM: 61.7
2654 Male, age 80, both hemispheres 72.6
2141 Male, age 76, both hemispheres 71.2
2751 Female, age 85, both hemispheres 63.3
2360 Male, age 74, both hemispheres 52.1
2337 Male, age 61, both hemispheres 49.2
Gigantocellular reticular nuclei, medullary
nTPM: 67.4
2462 Male, age 74, both hemispheres 87.6
2314 Male, age 61, both hemispheres 72.2
2310 Male, age 80, both hemispheres 67.7
2022 Male, age 76, right hemisphere 67.4
1876 Female, age 85, both hemispheres 56.6
2387 Female, age 91, both hemispheres 53.0
Gigantocellular reticular nuclei, pars
nTPM: 74.8
2084 Female, age 85, both hemispheres 89.8
2168 Male, age 76, both hemispheres 89.2
2336 Male, age 61, both hemispheres 76.0
2330 Male, age 80, both hemispheres 60.6
2706 Male, age 80, both hemispheres 58.4
Inferior olive
nTPM: 74.0
2085 Female, age 85, both hemispheres 95.8
2563 Male, age 74, both hemispheres 84.6
2628 Female, age 91, both hemispheres 74.4
2178 Male, age 61, both hemispheres 64.7
2379 Male, age 80, both hemispheres 50.7
Kolliker-Fuse nucleus
nTPM: 71.0
2163 Male, age 80, both hemispheres 85.3
2315 Male, age 76, right hemisphere 64.4
2793 Female, age 91, left hemisphere 63.4
Lateral lemniscal nuclei
nTPM: 72.8
2169 Male, age 76, both hemispheres 86.3
2746 Female, age 85, left hemisphere 71.3
2453 Male, age 74, right hemisphere 69.9
2320 Female, age 91, left hemisphere 69.0
2036 Male, age 80, both hemispheres 67.5
Lateral medullary reticular nucleus
nTPM: 67.9
2044 Male, age 76, both hemispheres 80.1
2804 Female, age 91, both hemispheres 73.7
2305 Male, age 74, both hemispheres 67.1
2190 Female, age 85, both hemispheres 63.0
2852 Male, age 80, both hemispheres 62.6
2374 Male, age 61, both hemispheres 60.8
Lateral parabrachial nucleus
nTPM: 60.5
2139 Female, age 85, right hemisphere 89.3
2013 Male, age 80, both hemispheres 60.0
2790 Male, age 61, both hemispheres 52.0
2792 Male, age 76, both hemispheres 40.8
Lateral vestibular nucleus
nTPM: 84.7
2184 Male, age 76, both hemispheres 104.0
2311 Male, age 80, both hemispheres 65.4
Locus coeruleus
nTPM: 72.6
2123 Female, age 91, both hemispheres 104.2
1980 Male, age 76, both hemispheres 83.9
2014 Male, age 55, unknown 76.2
2317 Female, age 72, unknown 70.5
2162 Male, age 80, both hemispheres 70.4
2720 Male, age 74, both hemispheres 57.7
2788 Male, age 74, unknown 45.2
Medial olivary nucleus
nTPM: 48.4
2138 Female, age 91, both hemispheres 53.2
1962 Male, age 76, both hemispheres 49.7
2851 Male, age 80, both hemispheres 47.4
1943 Male, age 61, both hemispheres 43.4
Medial parabrachial nucleus
nTPM: 67.7
2156 Male, age 61, both hemispheres 76.9
2463 Female, age 85, right hemisphere 72.0
2170 Female, age 91, both hemispheres 70.0
2786 Male, age 76, both hemispheres 67.1
2854 Male, age 80, both hemispheres 52.6
Medial periolivary nuclei
nTPM: 70.5
2171 Female, age 85, both hemispheres 99.2
2063 Male, age 76, both hemispheres 90.8
2458 Female, age 91, both hemispheres 60.3
2791 Male, age 74, right hemisphere 51.3
2081 Male, age 80, both hemispheres 51.0
Medial vestibular nucleus
nTPM: 90.6
2624 Male, age 61, both hemispheres 116.0
2134 Male, age 76, both hemispheres 102.5
2093 Male, age 80, both hemispheres 95.1
2743 Female, age 85, both hemispheres 81.6
2801 Male, age 74, both hemispheres 80.9
2803 Female, age 91, both hemispheres 67.2
Motor facial nucleus
nTPM: 77.2
2062 Male, age 76, both hemispheres 115.3
2126 Male, age 61, both hemispheres 81.5
2327 Male, age 80, both hemispheres 69.6
2697 Female, age 85, both hemispheres 67.2
2365 Male, age 74, right hemisphere 65.5
2795 Female, age 91, both hemispheres 64.3
Motor hypoglossal nucleus
nTPM: 78.5
2125 Female, age 91, both hemispheres 99.6
2132 Female, age 85, both hemispheres 86.2
2182 Male, age 80, both hemispheres 77.4
2461 Male, age 61, both hemispheres 65.8
2277 Male, age 76, both hemispheres 63.6
Motor trigeminal nucleus
nTPM: 69.0
2560 Male, age 74, both hemispheres 75.0
2309 Male, age 76, both hemispheres 72.2
2335 Male, age 61, both hemispheres 67.9
2079 Male, age 80, both hemispheres 65.2
2321 Female, age 91, both hemispheres 64.8
Nuclei of the trapezoid body
nTPM: 95.2
2159 Male, age 61, both hemispheres 117.2
1983 Male, age 76, both hemispheres 112.6
2735 Female, age 85, both hemispheres 101.4
2166 Male, age 80, both hemispheres 77.1
2368 Female, age 91, both hemispheres 67.6
Nucleus ambiguus
nTPM: 99.2
2096 Female, age 85, both hemispheres 138.0
2071 Male, age 76, both hemispheres 60.4
Nucleus cuneatus
nTPM: 71.3
2100 Male, age 76, both hemispheres 106.0
2564 Male, age 74, both hemispheres 89.3
2562 Male, age 61, both hemispheres 81.9
2805 Female, age 91, both hemispheres 62.1
2380 Male, age 80, both hemispheres 45.3
2808 Female, age 85, both hemispheres 43.3
Nucleus gracilis
nTPM: 58.0
2627 Male, age 74, both hemispheres 72.4
2299 Female, age 85, both hemispheres 55.6
2382 Male, age 80, both hemispheres 46.0
Nucleus raphe magnus
nTPM: 84.7
2160 Male, age 61, both hemispheres 116.0
2172 Female, age 85, both hemispheres 94.8
2328 Male, age 80, both hemispheres 83.0
2455 Male, age 74, both hemispheres 81.5
2051 Male, age 76, both hemispheres 74.7
2459 Female, age 91, both hemispheres 58.4
Nucleus raphe obscurus
nTPM: 54.2
2845 Female, age 85, midline 56.6
2800 Male, age 61, midline 53.7
2142 Male, age 76, midline 52.2
Nucleus raphe pallidus
nTPM: 52.9
2183 Male, age 80, midline 65.9
1924 Male, age 61, midline 51.5
2145 Male, age 76, midline 41.3
Nucleus tractus solitarii
nTPM: 55.3
2191 Female, age 85, both hemispheres 63.7
2656 Male, age 76, both hemispheres 57.8
2307 Male, age 80, both hemispheres 51.6
2144 Female, age 91, right hemisphere 48.1
Paramedian reticular nucleus
nTPM: 70.7
2313 Male, age 61, both hemispheres 93.6
2050 Female, age 85, both hemispheres 75.6
2057 Male, age 80, both hemispheres 73.6
2052 Male, age 76, both hemispheres 39.8
Parvicellular reticular nuclei
nTPM: 67.4
2558 Male, age 74, both hemispheres 71.0
2119 Male, age 80, both hemispheres 67.5
2095 Male, age 76, both hemispheres 63.8
Parvicellular reticular nuclei, medullary
nTPM: 77.8
2091 Female, age 85, both hemispheres 93.1
2189 Female, age 91, both hemispheres 72.7
2181 Male, age 80, left hemisphere 67.7
Peritrigeminal nucleus
nTPM: 91.9
2067 Female, age 85, both hemispheres 96.7
2136 Male, age 76, both hemispheres 91.2
2179 Male, age 61, both hemispheres 87.8
Pontine nuclei
nTPM: 89.9
2787 Female, age 85, both hemispheres 122.8
1968 Male, age 76, left hemisphere 106.7
2109 Female, age 72, unknown 102.8
1863 Male, age 55, unknown 102.0
2727 Male, age 61, right hemisphere 100.5
2115 Male, age 80, left hemisphere 73.3
2454 Male, age 74, left hemisphere 62.9
2319 Female, age 91, both hemispheres 48.5
Pontine raphe nucleus
nTPM: 64.2
2853 Male, age 76, midline 66.6
2122 Female, age 85, midline 61.8
Posteroventral cochlear nucleus
nTPM: 65.4
2752 Female, age 85, both hemispheres 79.4
2070 Male, age 76, both hemispheres 78.3
2371 Male, age 61, both hemispheres 74.3
2341 Male, age 80, both hemispheres 50.6
2135 Female, age 91, both hemispheres 44.7
Prepositus hypoglossal nucleus
nTPM: 75.2
2086 Male, age 80, both hemispheres 79.2
2855 Female, age 85, right hemisphere 71.3
Principal sensory trigeminal nucleus
nTPM: 84.1
2158 Male, age 61, both hemispheres 112.9
2324 Male, age 76, both hemispheres 102.3
2008 Male, age 80, left hemisphere 72.4
2367 Female, age 91, left hemisphere 48.8
Reticular pontine nucleus, caudal
nTPM: 74.3
2332 Male, age 80, right hemisphere 88.3
2092 Male, age 76, both hemispheres 87.6
2457 Female, age 91, both hemispheres 64.0
2559 Male, age 74, both hemispheres 57.5
Reticular pontine nucleus, oral
nTPM: 65.9
2361 Male, age 74, both hemispheres 75.1
2167 Male, age 76, both hemispheres 71.5
1939 Male, age 80, both hemispheres 64.9
2012 Female, age 85, both hemispheres 63.2
2366 Female, age 91, both hemispheres 54.7
Reticulotegmental nucleus
nTPM: 73.3
2325 Male, age 76, both hemispheres 77.9
2333 Male, age 80, both hemispheres 76.4
2452 Male, age 74, both hemispheres 72.7
2322 Female, age 91, both hemispheres 66.2
Spinal trigeminal nucleus, caudal
nTPM: 82.5
2447 Male, age 76, both hemispheres 116.5
2390 Female, age 91, both hemispheres 83.5
2312 Male, age 61, both hemispheres 73.4
2642 Male, age 74, both hemispheres 71.6
2308 Male, age 80, both hemispheres 67.4
Spinal trigeminal nucleus, interpolar
nTPM: 84.1
2625 Male, age 61, both hemispheres 148.3
2066 Male, age 76, right hemisphere 78.9
2389 Female, age 91, both hemispheres 71.3
2033 Male, age 80, both hemispheres 67.1
2386 Female, age 85, both hemispheres 55.1
Spinal trigeminal nucleus, oral
nTPM: 84.9
2164 Male, age 80, both hemispheres 88.7
2737 Female, age 85, both hemispheres 84.4
1978 Male, age 76, both hemispheres 81.5
Spinal vestibular nucleus
nTPM: 71.4
2748 Male, age 76, both hemispheres 82.2
2186 Female, age 91, both hemispheres 81.9
2780 Male, age 80, both hemispheres 77.5
2796 Male, age 61, both hemispheres 71.7
2384 Male, age 74, both hemispheres 59.3
2806 Female, age 85, both hemispheres 55.9
Subcoeruleus area
nTPM: 64.9
2451 Male, age 74, both hemispheres 74.0
2323 Female, age 91, left hemisphere 69.0
1958 Male, age 80, both hemispheres 65.8
2089 Male, age 76, left hemisphere 64.6
2369 Female, age 85, left hemisphere 50.9
Superior olive
nTPM: 69.7
2329 Male, age 80, right hemisphere 78.8
2561 Female, age 91, both hemispheres 71.8
1875 Female, age 85, both hemispheres 67.8
2020 Male, age 76, both hemispheres 65.9
2364 Male, age 74, right hemisphere 64.2
Superior vestibular nucleus
nTPM: 62.8
2061 Male, age 76, both hemispheres 84.5
2015 Male, age 80, both hemispheres 62.1
2383 Male, age 74, both hemispheres 41.6
Ventral medullary reticular nucleus
nTPM: 71.9
2060 Male, age 76, both hemispheres 78.3
2372 Male, age 61, both hemispheres 65.5
Ventral periolivary nuclei
nTPM: 66.8
2165 Male, age 80, both hemispheres 88.7
2130 Female, age 85, both hemispheres 62.0
2794 Female, age 91, left hemisphere 61.0
2023 Male, age 76, both hemispheres 55.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 79.3
2741 Female, age 85, both hemispheres 91.0
1986 Male, age 76, both hemispheres 87.6
2302 Female, age 91, both hemispheres 80.8
2180 Male, age 61, both hemispheres 70.9
2118 Male, age 80, both hemispheres 66.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 65.9
2449 Male, age 74, both hemispheres 77.9
2161 Male, age 80, both hemispheres 73.8
1959 Male, age 76, both hemispheres 72.0
2456 Female, age 91, both hemispheres 65.1
2840 Female, age 85, both hemispheres 57.3
2359 Male, age 61, both hemispheres 49.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 460.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 320.2
FF:10182-103D2 60 years, female 418.6
FF:10165-103B3 76 years, female 221.8
Medulla oblongata
Scaled Tags Per Million: 247.7
FF:10038-101F2 18-64 years, mixed 333.4
FF:10174-103C3 60 years, female 239.4
FF:10155-103A2 76 years, female 170.2
Pons
Scaled Tags Per Million: 460.6
FF:10033-101E6 18-54 years, mixed 460.6

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 273.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 239.6
Samples: 4

Max nTPM: 268.6
Min nTPM: 207.0
Sample A Female 207.0
Sample B Female 250.6
Sample C Male 268.6
Sample D Male 232.0
Pons
nTPM: 273.4
Samples: 4

Max nTPM: 349.6
Min nTPM: 183.3
Sample A Female 349.6
Sample B Female 183.3
Sample C Male 232.0
Sample D Male 328.8

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 263.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 263.2
Samples: 4

Max nTPM: 286.2
Min nTPM: 239.3
Sample A Male 284.8
Sample B Male 242.3
Sample C Female 286.2
Sample D Female 239.3

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 12.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 12.5
81600110 Antisense, RP_080205_02_D02, Mouse strain C57BL/6J (56 days, male) 15.0
413792 Antisense, RP_040809_01_E02, Mouse strain C57BL/6J (56 days, male) 10.0
Pons
Expression energy: 11.3
81600110 Antisense, RP_080205_02_D02, Mouse strain C57BL/6J (56 days, male) 13.4
413792 Antisense, RP_040809_01_E02, Mouse strain C57BL/6J (56 days, male) 9.2

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The Human Protein Atlas

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