HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.9 nTPM
HPA:51.9 nTPM
GTEx:63.6 nTPM
FANTOM5:53.2 Scaled Tags Per Million
Mouse:90.0 nTPM
Allen mouse:25.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048985
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.9
Sample id Sample description nTPM
Hippocampus
nTPM: 50.6
1898 Male, age 80, left hemisphere 53.5
2529 Female, age 94, left hemisphere 52.5
2148 Female, age 91, left hemisphere 51.0
1911 Female, age 85, right hemisphere 49.5
1855 Male, age 76, left hemisphere 49.0
2621 Female, age 67, right hemisphere 48.1
Dentate gyrus
nTPM: 51.0
2530 Female, age 94, left hemisphere 53.9
2010 Male, age 76, both hemispheres 53.6
1927 Female, age 91, both hemispheres 52.3
2528 Male, age 74, both hemispheres 51.7
2531 Female, age 67, both hemispheres 47.6
2246 Female, age 85, both hemispheres 46.8
Entorhinal gyrus
nTPM: 50.0
2764 Male, age 80, right hemisphere 53.4
1787 Male, age 76, left hemisphere 50.3
1938 Female, age 85, left hemisphere 50.1
2117 Female, age 91, right hemisphere 49.5
2686 Male, age 75, right hemisphere 48.8
2613 Female, age 94, left hemisphere 48.2
Hippocampus, CA1
nTPM: 51.2
2749 Male, age 80, left hemisphere 57.6
1873 Female, age 85, both hemispheres 53.1
2527 Male, age 74, both hemispheres 49.1
2045 Male, age 76, both hemispheres 48.6
2082 Female, age 91, right hemisphere 47.4
Hippocampus, CA2
nTPM: 51.9
1963 Male, age 80, left hemisphere 56.1
1892 Male, age 76, both hemispheres 55.9
2437 Female, age 94, left hemisphere 50.8
2249 Male, age 74, both hemispheres 50.2
1940 Female, age 85, left hemisphere 50.0
2113 Female, age 91, right hemisphere 48.4
Hippocampus, CA3
nTPM: 50.4
1867 Male, age 76, both hemispheres 53.6
2137 Male, age 80, left hemisphere 51.7
2861 Female, age 67, both hemispheres 50.5
1891 Female, age 85, both hemispheres 49.3
2436 Male, age 74, both hemispheres 49.1
2620 Female, age 94, left hemisphere 48.5
Parahippocampal cortex
nTPM: 48.6
2692 Male, age 74, both hemispheres 50.3
1990 Female, age 91, right hemisphere 50.1
1850 Male, age 80, both hemispheres 49.9
1933 Female, age 85, both hemispheres 49.8
2250 Female, age 67, right hemisphere 49.7
2245 Female, age 91, both hemispheres 48.7
2018 Male, age 76, both hemispheres 48.4
2622 Female, age 67, right hemisphere 47.4
2532 Female, age 72, left hemisphere 46.3
2693 Female, age 94, both hemispheres 45.6
Perirhinal gyrus
nTPM: 49.1
1794 Male, age 80, right hemisphere 50.7
1847 Female, age 91, left hemisphere 50.0
1841 Female, age 85, right hemisphere 48.9
2521 Female, age 94, right hemisphere 48.0
2848 Male, age 76, right hemisphere 47.9
Subiculum
nTPM: 49.8
1901 Male, age 80, both hemispheres 53.1
2042 Male, age 76, both hemispheres 51.8
1977 Female, age 85, both hemispheres 50.3
2619 Male, age 74, both hemispheres 49.9
2729 Female, age 91, right hemisphere 48.8
2438 Female, age 94, left hemisphere 44.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.6
Samples: 197

Max nTPM: 128.7
Min nTPM: 21.0
Std nTPM: 16.1
Median nTPM: 61.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 128.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 119.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 115.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 110.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 102.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 100.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 97.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 97.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 93.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 91.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 91.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.2
FF:10169-103B7 60 years, female 54.4
FF:10153-102I9 76 years, female 52.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 85.2
Samples: 4

Max nTPM: 95.1
Min nTPM: 74.5
Sample A Male 87.5
Sample B Male 83.7
Sample C Female 95.1
Sample D Female 74.5
Hippocampal formation
nTPM: 90.0
Samples: 4

Max nTPM: 97.2
Min nTPM: 80.9
Sample A Male 90.2
Sample B Male 80.9
Sample C Female 91.8
Sample D Female 97.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.8
512769 Antisense, RP_040809_02_D07, Mouse strain C57BL/6J (56 days, male) 25.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.