HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:33.4 nTPM
HPA:33.4 nTPM
GTEx:27.2 nTPM
FANTOM5:47.3 Scaled Tags Per Million
Pig:18.9 nTPM
Mouse:23.2 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.4
Sample id Sample description nTPM
Hippocampus
nTPM: 31.3
2529 Female, age 94, left hemisphere 34.5
1911 Female, age 85, right hemisphere 32.1
1898 Male, age 80, left hemisphere 31.1
1855 Male, age 76, left hemisphere 30.3
2148 Female, age 91, left hemisphere 30.0
2621 Female, age 67, right hemisphere 30.0
Dentate gyrus
nTPM: 30.8
2528 Male, age 74, both hemispheres 35.4
2010 Male, age 76, both hemispheres 34.1
2530 Female, age 94, left hemisphere 30.7
2246 Female, age 85, both hemispheres 29.5
2531 Female, age 67, both hemispheres 27.8
1927 Female, age 91, both hemispheres 27.5
Entorhinal gyrus
nTPM: 33.3
2117 Female, age 91, right hemisphere 37.3
1787 Male, age 76, left hemisphere 36.4
2764 Male, age 80, right hemisphere 35.8
1938 Female, age 85, left hemisphere 31.9
2686 Male, age 75, right hemisphere 29.2
2613 Female, age 94, left hemisphere 29.0
Hippocampus, CA1
nTPM: 31.4
2082 Female, age 91, right hemisphere 36.1
2045 Male, age 76, both hemispheres 33.2
2527 Male, age 74, both hemispheres 32.0
1873 Female, age 85, both hemispheres 31.2
2749 Male, age 80, left hemisphere 24.5
Hippocampus, CA2
nTPM: 32.3
2249 Male, age 74, both hemispheres 37.3
2113 Female, age 91, right hemisphere 34.1
2437 Female, age 94, left hemisphere 31.9
1940 Female, age 85, left hemisphere 31.7
1963 Male, age 80, left hemisphere 31.3
1892 Male, age 76, both hemispheres 27.3
Hippocampus, CA3
nTPM: 27.6
1891 Female, age 85, both hemispheres 32.0
1867 Male, age 76, both hemispheres 30.2
2436 Male, age 74, both hemispheres 29.4
2861 Female, age 67, both hemispheres 26.4
2620 Female, age 94, left hemisphere 25.8
2137 Male, age 80, left hemisphere 21.6
Parahippocampal cortex
nTPM: 31.5
2018 Male, age 76, both hemispheres 40.6
1990 Female, age 91, right hemisphere 32.8
2622 Female, age 67, right hemisphere 31.7
2532 Female, age 72, left hemisphere 31.4
2250 Female, age 67, right hemisphere 30.6
2692 Male, age 74, both hemispheres 30.4
1933 Female, age 85, both hemispheres 30.2
2245 Female, age 91, both hemispheres 30.0
1850 Male, age 80, both hemispheres 29.7
2693 Female, age 94, both hemispheres 28.0
Perirhinal gyrus
nTPM: 29.2
1794 Male, age 80, right hemisphere 31.6
2521 Female, age 94, right hemisphere 30.2
1841 Female, age 85, right hemisphere 28.8
1847 Female, age 91, left hemisphere 28.7
2848 Male, age 76, right hemisphere 26.7
Subiculum
nTPM: 33.4
2042 Male, age 76, both hemispheres 35.6
2619 Male, age 74, both hemispheres 35.5
1977 Female, age 85, both hemispheres 34.5
2729 Female, age 91, right hemisphere 34.3
1901 Male, age 80, both hemispheres 30.4
2438 Female, age 94, left hemisphere 29.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.2
Samples: 197

Max nTPM: 69.5
Min nTPM: 7.5
Std nTPM: 9.2
Median nTPM: 25.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 69.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 61.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 59.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 55.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 54.8
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 51.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 47.5
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 45.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 44.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 42.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 42.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.3
FF:10153-102I9 76 years, female 67.5
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 19.6
Min nTPM: 13.8
Sample A Female 19.6
Sample B Female 18.6
Sample C Male 19.5
Sample D Male 13.8
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 20.0
Min nTPM: 14.3
Sample A Female 17.5
Sample B Female 18.0
Sample C Male 20.0
Sample D Male 14.3
Subiculum
nTPM: 17.8
Samples: 4

Max nTPM: 21.2
Min nTPM: 14.2
Sample A Female 21.2
Sample B Female 18.5
Sample C Male 17.4
Sample D Male 14.2
Ventral hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 24.2
Min nTPM: 16.2
Sample A Female 19.1
Sample B Female 16.2
Sample C Male 24.2
Sample D Male 16.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.6
Samples: 4

Max nTPM: 23.8
Min nTPM: 21.4
Sample A Male 23.8
Sample B Male 21.4
Sample C Female 23.5
Sample D Female 21.7
Hippocampal formation
nTPM: 23.2
Samples: 4

Max nTPM: 26.4
Min nTPM: 20.9
Sample A Male 22.0
Sample B Male 23.6
Sample C Female 20.9
Sample D Female 26.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
69014728 Antisense, RP_050310_01_F02, Mouse strain C57BL/6J (56 days, male) 3.7

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