PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:187.1 nTPM
HPA:187.1 nTPM
FANTOM5:289.6 Scaled Tags Per Million
Pig:24.9 nTPM
Mouse:27.1 nTPM
Allen mouse:1.9 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 187.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 125.1
2090 Male, age 80, both hemispheres 139.3
2188 Female, age 91, both hemispheres 134.8
2301 Female, age 85, both hemispheres 130.4
1984 Male, age 76, both hemispheres 95.8
Area postrema
nTPM: 147.5
2306 Male, age 80, both hemispheres 191.0
2799 Male, age 61, both hemispheres 150.1
2054 Male, age 76, both hemispheres 101.5
Cuneate nuclei
nTPM: 136.1
2376 Male, age 61, both hemispheres 145.0
2131 Male, age 76, both hemispheres 138.8
2381 Male, age 80, both hemispheres 124.5
Dorsal cochlear nucleus
nTPM: 136.5
2802 Male, age 74, right hemisphere 141.7
2378 Male, age 80, both hemispheres 141.0
2370 Male, age 61, both hemispheres 140.9
2058 Male, age 76, both hemispheres 132.1
2187 Female, age 91, both hemispheres 126.8
Dorsal medullary reticular nucleus
nTPM: 141.3
2040 Female, age 85, both hemispheres 143.6
2373 Male, age 61, both hemispheres 141.9
2088 Male, age 76, both hemispheres 138.5
Dorsal motor vagal complex
nTPM: 120.8
2185 Male, age 76, both hemispheres 185.9
2000 Male, age 74, unknown 134.9
2643 Male, age 74, both hemispheres 133.8
2133 Female, age 91, both hemispheres 128.7
2844 Male, age 55, unknown 101.6
2807 Female, age 85, both hemispheres 98.8
2797 Male, age 61, both hemispheres 97.1
2813 Female, age 72, unknown 85.7
Dorsal tegmental nucleus
nTPM: 128.3
2083 Male, age 80, both hemispheres 177.8
2326 Male, age 74, both hemispheres 128.8
1936 Male, age 76, left hemisphere 113.1
2358 Male, age 61, both hemispheres 93.4
Dorsolateral tegmental area
nTPM: 126.3
2654 Male, age 80, both hemispheres 162.3
2751 Female, age 85, both hemispheres 144.5
2337 Male, age 61, both hemispheres 132.2
2360 Male, age 74, both hemispheres 103.6
2141 Male, age 76, both hemispheres 89.1
Gigantocellular reticular nuclei, medullary
nTPM: 136.7
2387 Female, age 91, both hemispheres 153.2
2310 Male, age 80, both hemispheres 141.2
1876 Female, age 85, both hemispheres 138.8
2314 Male, age 61, both hemispheres 136.0
2022 Male, age 76, right hemisphere 130.4
2462 Male, age 74, both hemispheres 120.5
Gigantocellular reticular nuclei, pars
nTPM: 136.2
2336 Male, age 61, both hemispheres 143.7
2330 Male, age 80, both hemispheres 140.1
2706 Male, age 80, both hemispheres 132.9
2084 Female, age 85, both hemispheres 132.7
2168 Male, age 76, both hemispheres 131.5
Inferior olive
nTPM: 130.0
2628 Female, age 91, both hemispheres 145.8
2178 Male, age 61, both hemispheres 137.8
2085 Female, age 85, both hemispheres 128.6
2563 Male, age 74, both hemispheres 128.2
2379 Male, age 80, both hemispheres 109.6
Kolliker-Fuse nucleus
nTPM: 131.7
2793 Female, age 91, left hemisphere 155.8
2163 Male, age 80, both hemispheres 133.2
2315 Male, age 76, right hemisphere 106.1
Lateral lemniscal nuclei
nTPM: 153.5
2036 Male, age 80, both hemispheres 182.1
2320 Female, age 91, left hemisphere 167.8
2746 Female, age 85, left hemisphere 151.4
2453 Male, age 74, right hemisphere 137.1
2169 Male, age 76, both hemispheres 129.3
Lateral medullary reticular nucleus
nTPM: 132.7
2852 Male, age 80, both hemispheres 164.2
2044 Male, age 76, both hemispheres 139.7
2305 Male, age 74, both hemispheres 137.1
2190 Female, age 85, both hemispheres 128.5
2374 Male, age 61, both hemispheres 122.2
2804 Female, age 91, both hemispheres 104.1
Lateral parabrachial nucleus
nTPM: 149.5
2013 Male, age 80, both hemispheres 160.3
2792 Male, age 76, both hemispheres 151.1
2790 Male, age 61, both hemispheres 147.8
2139 Female, age 85, right hemisphere 138.6
Lateral vestibular nucleus
nTPM: 128.0
2184 Male, age 76, both hemispheres 136.4
2311 Male, age 80, both hemispheres 119.5
Locus coeruleus
nTPM: 95.5
2317 Female, age 72, unknown 110.7
2162 Male, age 80, both hemispheres 107.6
2123 Female, age 91, both hemispheres 101.2
2014 Male, age 55, unknown 98.9
2720 Male, age 74, both hemispheres 93.6
1980 Male, age 76, both hemispheres 83.7
2788 Male, age 74, unknown 72.9
Medial olivary nucleus
nTPM: 145.8
1943 Male, age 61, both hemispheres 183.2
2138 Female, age 91, both hemispheres 136.9
2851 Male, age 80, both hemispheres 135.5
1962 Male, age 76, both hemispheres 127.5
Medial parabrachial nucleus
nTPM: 129.6
2463 Female, age 85, right hemisphere 146.8
2156 Male, age 61, both hemispheres 135.4
2786 Male, age 76, both hemispheres 127.9
2170 Female, age 91, both hemispheres 124.5
2854 Male, age 80, both hemispheres 113.6
Medial periolivary nuclei
nTPM: 137.8
2081 Male, age 80, both hemispheres 170.8
2458 Female, age 91, both hemispheres 146.1
2063 Male, age 76, both hemispheres 133.6
2171 Female, age 85, both hemispheres 121.7
2791 Male, age 74, right hemisphere 116.6
Medial vestibular nucleus
nTPM: 122.2
2093 Male, age 80, both hemispheres 141.1
2624 Male, age 61, both hemispheres 139.6
2803 Female, age 91, both hemispheres 135.8
2801 Male, age 74, both hemispheres 117.4
2134 Male, age 76, both hemispheres 101.3
2743 Female, age 85, both hemispheres 97.9
Motor facial nucleus
nTPM: 138.2
2126 Male, age 61, both hemispheres 159.9
2327 Male, age 80, both hemispheres 140.9
2697 Female, age 85, both hemispheres 139.3
2062 Male, age 76, both hemispheres 135.3
2365 Male, age 74, right hemisphere 132.3
2795 Female, age 91, both hemispheres 121.8
Motor hypoglossal nucleus
nTPM: 132.0
2125 Female, age 91, both hemispheres 159.5
2132 Female, age 85, both hemispheres 154.7
2182 Male, age 80, both hemispheres 150.3
2277 Male, age 76, both hemispheres 98.3
2461 Male, age 61, both hemispheres 97.0
Motor trigeminal nucleus
nTPM: 144.3
2560 Male, age 74, both hemispheres 166.7
2321 Female, age 91, both hemispheres 156.0
2079 Male, age 80, both hemispheres 147.0
2309 Male, age 76, both hemispheres 133.3
2335 Male, age 61, both hemispheres 118.7
Nuclei of the trapezoid body
nTPM: 143.4
2159 Male, age 61, both hemispheres 168.2
2166 Male, age 80, both hemispheres 160.5
2368 Female, age 91, both hemispheres 140.3
1983 Male, age 76, both hemispheres 131.3
2735 Female, age 85, both hemispheres 116.6
Nucleus ambiguus
nTPM: 187.1
2096 Female, age 85, both hemispheres 209.7
2071 Male, age 76, both hemispheres 164.5
Nucleus cuneatus
nTPM: 140.8
2100 Male, age 76, both hemispheres 167.3
2380 Male, age 80, both hemispheres 151.0
2562 Male, age 61, both hemispheres 136.9
2564 Male, age 74, both hemispheres 134.8
2808 Female, age 85, both hemispheres 131.9
2805 Female, age 91, both hemispheres 122.8
Nucleus gracilis
nTPM: 161.1
2382 Male, age 80, both hemispheres 184.4
2299 Female, age 85, both hemispheres 151.7
2627 Male, age 74, both hemispheres 147.1
Nucleus raphe magnus
nTPM: 140.9
2459 Female, age 91, both hemispheres 172.4
2328 Male, age 80, both hemispheres 168.5
2051 Male, age 76, both hemispheres 147.4
2160 Male, age 61, both hemispheres 120.4
2455 Male, age 74, both hemispheres 119.1
2172 Female, age 85, both hemispheres 117.6
Nucleus raphe obscurus
nTPM: 143.7
2142 Male, age 76, midline 167.4
2845 Female, age 85, midline 134.3
2800 Male, age 61, midline 129.5
Nucleus raphe pallidus
nTPM: 141.1
1924 Male, age 61, midline 158.6
2183 Male, age 80, midline 134.9
2145 Male, age 76, midline 129.8
Nucleus tractus solitarii
nTPM: 87.1
2656 Male, age 76, both hemispheres 104.3
2307 Male, age 80, both hemispheres 100.8
2191 Female, age 85, both hemispheres 77.8
2144 Female, age 91, right hemisphere 65.4
Paramedian reticular nucleus
nTPM: 126.9
2057 Male, age 80, both hemispheres 155.3
2050 Female, age 85, both hemispheres 126.9
2313 Male, age 61, both hemispheres 125.5
2052 Male, age 76, both hemispheres 100.1
Parvicellular reticular nuclei
nTPM: 134.5
2558 Male, age 74, both hemispheres 135.9
2119 Male, age 80, both hemispheres 135.0
2095 Male, age 76, both hemispheres 132.5
Parvicellular reticular nuclei, medullary
nTPM: 135.2
2189 Female, age 91, both hemispheres 147.3
2091 Female, age 85, both hemispheres 141.4
2181 Male, age 80, left hemisphere 116.8
Peritrigeminal nucleus
nTPM: 132.4
2067 Female, age 85, both hemispheres 134.0
2179 Male, age 61, both hemispheres 131.7
2136 Male, age 76, both hemispheres 131.4
Pontine nuclei
nTPM: 170.7
2115 Male, age 80, left hemisphere 186.9
2454 Male, age 74, left hemisphere 179.4
1863 Male, age 55, unknown 174.5
1968 Male, age 76, left hemisphere 173.9
2109 Female, age 72, unknown 171.6
2727 Male, age 61, right hemisphere 166.2
2787 Female, age 85, both hemispheres 163.4
2319 Female, age 91, both hemispheres 150.0
Pontine raphe nucleus
nTPM: 120.4
2122 Female, age 85, midline 131.2
2853 Male, age 76, midline 109.5
Posteroventral cochlear nucleus
nTPM: 144.6
2070 Male, age 76, both hemispheres 162.8
2135 Female, age 91, both hemispheres 156.3
2341 Male, age 80, both hemispheres 141.5
2371 Male, age 61, both hemispheres 136.4
2752 Female, age 85, both hemispheres 126.3
Prepositus hypoglossal nucleus
nTPM: 106.2
2086 Male, age 80, both hemispheres 110.8
2855 Female, age 85, right hemisphere 101.6
Principal sensory trigeminal nucleus
nTPM: 131.1
2367 Female, age 91, left hemisphere 142.0
2008 Male, age 80, left hemisphere 130.7
2324 Male, age 76, both hemispheres 128.5
2158 Male, age 61, both hemispheres 123.1
Reticular pontine nucleus, caudal
nTPM: 159.6
2457 Female, age 91, both hemispheres 164.0
2332 Male, age 80, right hemisphere 162.1
2559 Male, age 74, both hemispheres 156.4
2092 Male, age 76, both hemispheres 156.0
Reticular pontine nucleus, oral
nTPM: 151.4
2366 Female, age 91, both hemispheres 164.8
1939 Male, age 80, both hemispheres 155.2
2361 Male, age 74, both hemispheres 153.8
2012 Female, age 85, both hemispheres 144.9
2167 Male, age 76, both hemispheres 138.5
Reticulotegmental nucleus
nTPM: 133.2
2452 Male, age 74, both hemispheres 155.1
2333 Male, age 80, both hemispheres 152.8
2322 Female, age 91, both hemispheres 134.7
2325 Male, age 76, both hemispheres 90.1
Spinal trigeminal nucleus, caudal
nTPM: 139.6
2312 Male, age 61, both hemispheres 154.7
2308 Male, age 80, both hemispheres 145.6
2447 Male, age 76, both hemispheres 144.5
2642 Male, age 74, both hemispheres 127.5
2390 Female, age 91, both hemispheres 125.8
Spinal trigeminal nucleus, interpolar
nTPM: 124.0
2389 Female, age 91, both hemispheres 135.8
2625 Male, age 61, both hemispheres 128.5
2033 Male, age 80, both hemispheres 124.3
2386 Female, age 85, both hemispheres 117.9
2066 Male, age 76, right hemisphere 113.6
Spinal trigeminal nucleus, oral
nTPM: 133.1
2164 Male, age 80, both hemispheres 141.8
1978 Male, age 76, both hemispheres 140.1
2737 Female, age 85, both hemispheres 117.5
Spinal vestibular nucleus
nTPM: 145.3
2748 Male, age 76, both hemispheres 188.0
2384 Male, age 74, both hemispheres 154.8
2186 Female, age 91, both hemispheres 151.3
2780 Male, age 80, both hemispheres 141.1
2806 Female, age 85, both hemispheres 123.9
2796 Male, age 61, both hemispheres 112.9
Subcoeruleus area
nTPM: 133.9
2369 Female, age 85, left hemisphere 165.0
2089 Male, age 76, left hemisphere 142.5
2451 Male, age 74, both hemispheres 128.4
1958 Male, age 80, both hemispheres 119.0
2323 Female, age 91, left hemisphere 114.3
Superior olive
nTPM: 148.0
2329 Male, age 80, right hemisphere 170.7
2020 Male, age 76, both hemispheres 163.8
2561 Female, age 91, both hemispheres 142.7
1875 Female, age 85, both hemispheres 137.0
2364 Male, age 74, right hemisphere 125.9
Superior vestibular nucleus
nTPM: 110.0
2061 Male, age 76, both hemispheres 127.6
2015 Male, age 80, both hemispheres 116.0
2383 Male, age 74, both hemispheres 86.2
Ventral medullary reticular nucleus
nTPM: 158.6
2060 Male, age 76, both hemispheres 177.2
2372 Male, age 61, both hemispheres 140.0
Ventral periolivary nuclei
nTPM: 126.3
2023 Male, age 76, both hemispheres 151.4
2165 Male, age 80, both hemispheres 136.3
2130 Female, age 85, both hemispheres 110.8
2794 Female, age 91, left hemisphere 106.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 131.0
2118 Male, age 80, both hemispheres 150.1
1986 Male, age 76, both hemispheres 136.2
2180 Male, age 61, both hemispheres 124.0
2741 Female, age 85, both hemispheres 123.7
2302 Female, age 91, both hemispheres 120.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 140.2
2456 Female, age 91, both hemispheres 175.8
2161 Male, age 80, both hemispheres 150.5
1959 Male, age 76, both hemispheres 136.6
2449 Male, age 74, both hemispheres 133.3
2840 Female, age 85, both hemispheres 129.2
2359 Male, age 61, both hemispheres 115.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 289.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 289.6
FF:10165-103B3 76 years, female 305.9
FF:10182-103D2 60 years, female 273.3
Medulla oblongata
Scaled Tags Per Million: 198.8
FF:10155-103A2 76 years, female 215.0
FF:10038-101F2 18-64 years, mixed 213.6
FF:10174-103C3 60 years, female 167.8
Pons
Scaled Tags Per Million: 184.6
FF:10033-101E6 18-54 years, mixed 184.6

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 24.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 24.9
Samples: 4

Max nTPM: 27.7
Min nTPM: 20.9
Sample A Female 20.9
Sample B Female 27.1
Sample C Male 27.7
Sample D Male 23.7
Pons
nTPM: 21.6
Samples: 4

Max nTPM: 26.0
Min nTPM: 19.9
Sample A Female 20.3
Sample B Female 19.9
Sample C Male 20.0
Sample D Male 26.0

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 27.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 27.1
Samples: 4

Max nTPM: 28.0
Min nTPM: 26.3
Sample A Male 27.8
Sample B Male 26.3
Sample C Female 28.0
Sample D Female 26.3

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.9
69527860 Antisense, RP_050421_02_F04, Mouse strain C57BL/6J (56 days, male) 2.3
74658032 Antisense, RP_060220_04_C05, Mouse strain C57BL/6J (56 days, male) 1.5
Pons
Expression energy: 1.2
74658032 Antisense, RP_060220_04_C05, Mouse strain C57BL/6J (56 days, male) 1.2
69527860 Antisense, RP_050421_02_F04, Mouse strain C57BL/6J (56 days, male) 1.2

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