HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:138.7 nTPM
HPA:138.7 nTPM
GTEx:127.1 nTPM
FANTOM5:136.6 Scaled Tags Per Million
Pig:51.7 nTPM
Mouse:54.3 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001566
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 138.7
Sample id Sample description nTPM
Hippocampus
nTPM: 138.7
1855 Male, age 76, left hemisphere 150.6
1898 Male, age 80, left hemisphere 149.2
2529 Female, age 94, left hemisphere 141.1
2621 Female, age 67, right hemisphere 138.9
2148 Female, age 91, left hemisphere 127.9
1911 Female, age 85, right hemisphere 124.4
Dentate gyrus
nTPM: 132.1
2530 Female, age 94, left hemisphere 158.5
2010 Male, age 76, both hemispheres 136.4
2246 Female, age 85, both hemispheres 133.5
2528 Male, age 74, both hemispheres 128.1
2531 Female, age 67, both hemispheres 119.4
1927 Female, age 91, both hemispheres 116.8
Entorhinal gyrus
nTPM: 130.8
2117 Female, age 91, right hemisphere 142.8
2686 Male, age 75, right hemisphere 130.0
1938 Female, age 85, left hemisphere 128.9
2764 Male, age 80, right hemisphere 128.3
1787 Male, age 76, left hemisphere 127.4
2613 Female, age 94, left hemisphere 127.2
Hippocampus, CA1
nTPM: 129.9
1873 Female, age 85, both hemispheres 140.0
2749 Male, age 80, left hemisphere 137.2
2527 Male, age 74, both hemispheres 131.0
2082 Female, age 91, right hemisphere 125.2
2045 Male, age 76, both hemispheres 116.3
Hippocampus, CA2
nTPM: 128.9
2437 Female, age 94, left hemisphere 144.4
1963 Male, age 80, left hemisphere 136.5
1892 Male, age 76, both hemispheres 129.6
2113 Female, age 91, right hemisphere 122.4
2249 Male, age 74, both hemispheres 121.1
1940 Female, age 85, left hemisphere 119.3
Hippocampus, CA3
nTPM: 128.7
2861 Female, age 67, both hemispheres 142.5
2620 Female, age 94, left hemisphere 128.2
1867 Male, age 76, both hemispheres 127.4
2137 Male, age 80, left hemisphere 127.2
2436 Male, age 74, both hemispheres 126.5
1891 Female, age 85, both hemispheres 120.3
Parahippocampal cortex
nTPM: 129.7
2622 Female, age 67, right hemisphere 146.6
2692 Male, age 74, both hemispheres 142.2
2245 Female, age 91, both hemispheres 133.9
1933 Female, age 85, both hemispheres 131.9
2532 Female, age 72, left hemisphere 126.2
2250 Female, age 67, right hemisphere 125.2
1850 Male, age 80, both hemispheres 123.8
2018 Male, age 76, both hemispheres 123.3
2693 Female, age 94, both hemispheres 122.8
1990 Female, age 91, right hemisphere 120.9
Perirhinal gyrus
nTPM: 123.9
1794 Male, age 80, right hemisphere 129.1
1847 Female, age 91, left hemisphere 128.7
1841 Female, age 85, right hemisphere 122.7
2521 Female, age 94, right hemisphere 121.4
2848 Male, age 76, right hemisphere 117.6
Subiculum
nTPM: 131.1
2619 Male, age 74, both hemispheres 139.9
2438 Female, age 94, left hemisphere 139.2
2042 Male, age 76, both hemispheres 128.5
2729 Female, age 91, right hemisphere 127.3
1901 Male, age 80, both hemispheres 127.2
1977 Female, age 85, both hemispheres 124.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 127.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 127.1
Samples: 197

Max nTPM: 225.5
Min nTPM: 74.9
Std nTPM: 26.2
Median nTPM: 125.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 225.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 211.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 204.0
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 201.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 196.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 179.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 176.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 176.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 175.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 174.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 172.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 136.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 136.6
FF:10153-102I9 76 years, female 172.8
FF:10169-103B7 60 years, female 100.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.1
Samples: 4

Max nTPM: 60.7
Min nTPM: 28.9
Sample A Female 60.7
Sample B Female 45.2
Sample C Male 49.4
Sample D Male 28.9
Entorhinal cortex
nTPM: 41.1
Samples: 4

Max nTPM: 48.6
Min nTPM: 31.6
Sample A Female 41.5
Sample B Female 42.5
Sample C Male 48.6
Sample D Male 31.6
Subiculum
nTPM: 42.5
Samples: 4

Max nTPM: 51.6
Min nTPM: 37.0
Sample A Female 51.6
Sample B Female 39.3
Sample C Male 42.1
Sample D Male 37.0
Ventral hippocampus
nTPM: 51.7
Samples: 4

Max nTPM: 74.5
Min nTPM: 40.2
Sample A Female 49.3
Sample B Female 40.2
Sample C Male 74.5
Sample D Male 42.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.2
Samples: 4

Max nTPM: 59.2
Min nTPM: 50.1
Sample A Male 51.0
Sample B Male 50.1
Sample C Female 52.3
Sample D Female 59.2
Hippocampal formation
nTPM: 54.3
Samples: 4

Max nTPM: 56.0
Min nTPM: 51.1
Sample A Male 55.9
Sample B Male 54.1
Sample C Female 56.0
Sample D Female 51.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
77620794 Antisense, RP_070129_03_G08, Mouse strain C57BL/6J (56 days, male) 3.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.