HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:82.9 nTPM
HPA:82.9 nTPM
GTEx:70.5 nTPM
FANTOM5:74.9 Scaled Tags Per Million
Pig:92.8 nTPM
Mouse:133.6 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.9
Sample id Sample description nTPM
Hippocampus
nTPM: 81.7
1898 Male, age 80, left hemisphere 85.7
1855 Male, age 76, left hemisphere 82.3
1911 Female, age 85, right hemisphere 81.7
2529 Female, age 94, left hemisphere 81.3
2148 Female, age 91, left hemisphere 79.6
2621 Female, age 67, right hemisphere 79.3
Dentate gyrus
nTPM: 82.0
2530 Female, age 94, left hemisphere 84.2
1927 Female, age 91, both hemispheres 83.8
2010 Male, age 76, both hemispheres 83.8
2528 Male, age 74, both hemispheres 81.1
2246 Female, age 85, both hemispheres 80.5
2531 Female, age 67, both hemispheres 78.5
Entorhinal gyrus
nTPM: 81.2
2764 Male, age 80, right hemisphere 83.3
1938 Female, age 85, left hemisphere 82.9
1787 Male, age 76, left hemisphere 81.3
2117 Female, age 91, right hemisphere 80.9
2613 Female, age 94, left hemisphere 79.6
2686 Male, age 75, right hemisphere 79.2
Hippocampus, CA1
nTPM: 82.8
2749 Male, age 80, left hemisphere 87.6
1873 Female, age 85, both hemispheres 82.8
2045 Male, age 76, both hemispheres 82.7
2527 Male, age 74, both hemispheres 81.5
2082 Female, age 91, right hemisphere 79.2
Hippocampus, CA2
nTPM: 82.4
1963 Male, age 80, left hemisphere 86.9
1892 Male, age 76, both hemispheres 83.8
2249 Male, age 74, both hemispheres 83.1
2437 Female, age 94, left hemisphere 80.9
1940 Female, age 85, left hemisphere 80.3
2113 Female, age 91, right hemisphere 79.6
Hippocampus, CA3
nTPM: 80.5
1867 Male, age 76, both hemispheres 83.3
2137 Male, age 80, left hemisphere 82.8
1891 Female, age 85, both hemispheres 81.9
2436 Male, age 74, both hemispheres 80.7
2620 Female, age 94, left hemisphere 77.3
2861 Female, age 67, both hemispheres 77.0
Parahippocampal cortex
nTPM: 81.1
1850 Male, age 80, both hemispheres 84.0
2018 Male, age 76, both hemispheres 82.6
2250 Female, age 67, right hemisphere 82.4
1933 Female, age 85, both hemispheres 81.9
1990 Female, age 91, right hemisphere 81.7
2693 Female, age 94, both hemispheres 80.8
2245 Female, age 91, both hemispheres 80.6
2532 Female, age 72, left hemisphere 80.2
2692 Male, age 74, both hemispheres 79.9
2622 Female, age 67, right hemisphere 76.5
Perirhinal gyrus
nTPM: 82.9
1794 Male, age 80, right hemisphere 84.4
1847 Female, age 91, left hemisphere 84.4
1841 Female, age 85, right hemisphere 84.0
2521 Female, age 94, right hemisphere 81.4
2848 Male, age 76, right hemisphere 80.6
Subiculum
nTPM: 81.2
1977 Female, age 85, both hemispheres 83.6
1901 Male, age 80, both hemispheres 82.3
2042 Male, age 76, both hemispheres 81.3
2438 Female, age 94, left hemisphere 81.1
2729 Female, age 91, right hemisphere 80.0
2619 Male, age 74, both hemispheres 79.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 70.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.5
Samples: 197

Max nTPM: 192.5
Min nTPM: 38.5
Std nTPM: 17.3
Median nTPM: 68.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 192.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 132.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 124.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 120.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 110.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 106.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 105.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 100.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 98.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 97.8
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 95.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.9
FF:10169-103B7 60 years, female 85.8
FF:10153-102I9 76 years, female 64.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 92.8
Samples: 4

Max nTPM: 123.1
Min nTPM: 67.2
Sample A Female 123.1
Sample B Female 84.2
Sample C Male 96.5
Sample D Male 67.2
Entorhinal cortex
nTPM: 79.5
Samples: 4

Max nTPM: 101.0
Min nTPM: 62.7
Sample A Female 74.7
Sample B Female 101.0
Sample C Male 79.7
Sample D Male 62.7
Subiculum
nTPM: 79.0
Samples: 4

Max nTPM: 104.5
Min nTPM: 64.0
Sample A Female 104.5
Sample B Female 76.8
Sample C Male 64.0
Sample D Male 70.5
Ventral hippocampus
nTPM: 77.7
Samples: 4

Max nTPM: 88.0
Min nTPM: 64.6
Sample A Female 88.0
Sample B Female 64.6
Sample C Male 73.7
Sample D Male 84.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 133.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 129.8
Samples: 4

Max nTPM: 137.3
Min nTPM: 126.2
Sample A Male 126.2
Sample B Male 127.4
Sample C Female 137.3
Sample D Female 128.2
Hippocampal formation
nTPM: 133.6
Samples: 4

Max nTPM: 145.4
Min nTPM: 126.1
Sample A Male 145.4
Sample B Male 126.1
Sample C Female 130.0
Sample D Female 132.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
69262239 Antisense, RP_050301_01_G10, Mouse strain C57BL/6J (56 days, male) 5.2

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