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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM EPIDIDYMIS
ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:152.5 nTPM
HPA:152.5 nTPM
GTEx:85.1 nTPM
FANTOM5:196.3 Scaled Tags Per Million
Pig:137.6 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 152.5
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 143.2
2565 Male, age 75, midline 164.3
1981 Female, age 72, midline 155.9
2194 Female, age 79, both hemispheres 135.9
2048 Male, age 55, midline 131.8
2816 Male, age 47, midline 128.1
Cervical spinal cord, dorsal horn
nTPM: 144.1
2173 Female, age 72, unknown 162.8
2721 Male, age 90, both hemispheres 151.5
2297 Male, age 75, both hemispheres 146.7
2069 Male, age 47, both hemispheres 145.7
2296 Male, age 66, both hemispheres 129.4
1877 Male, age 55, unknown 128.4
Cervical spinal cord, ventral horn
nTPM: 152.5
2295 Male, age 66, both hemispheres 174.5
2809 Male, age 90, both hemispheres 168.0
2098 Female, age 72, unknown 161.1
2480 Male, age 75, both hemispheres 159.0
2068 Male, age 55, unknown 130.1
2820 Female, age 79, both hemispheres 122.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 85.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 85.1
Samples: 159

Max nTPM: 133.6
Min nTPM: 44.8
Std nTPM: 16.7
Median nTPM: 84.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 133.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 132.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 125.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 125.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 121.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 119.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 116.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 115.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 113.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 109.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 108.7
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 107.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 107.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 107.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 106.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 106.6
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 106.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 106.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 105.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 105.1
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 104.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 104.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 104.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 103.9
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 103.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 103.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 101.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 101.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 100.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 100.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 99.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 99.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 99.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 97.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 96.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 96.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 96.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 96.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 96.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 95.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 94.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 94.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 94.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 93.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 93.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 93.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 93.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 92.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 92.5
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 92.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 92.1
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 92.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 92.0
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 91.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 91.4
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 91.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 91.0
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 90.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 90.7
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 90.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 90.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 89.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 89.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 89.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 89.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 89.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 88.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 88.3
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 87.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 87.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 87.7
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 87.6
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 87.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 86.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 86.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 85.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 84.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 84.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 84.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 84.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 83.4
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 83.3
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 82.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 82.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 82.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 82.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 81.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 81.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 81.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 80.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 80.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 80.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 80.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 79.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 79.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 79.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 79.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 78.8
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 78.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 78.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 78.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 78.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 77.6
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 77.6
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 77.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 77.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 77.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 77.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 77.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 77.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 76.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 76.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 76.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 75.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 75.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 75.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 73.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 73.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 73.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 73.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 72.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 72.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 72.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 71.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 71.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 71.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 71.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 71.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 70.5
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 69.7
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 69.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 68.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 67.8
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 67.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 67.2
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 67.2
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 66.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 66.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 65.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 65.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 64.7
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 64.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 64.5
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 64.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 63.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 63.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 63.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 61.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 61.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 60.2
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 59.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 58.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 57.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 56.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 56.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 56.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 54.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 48.0
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 44.8
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 196.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 196.3
FF:10181-103D1 60 years, female 299.7
FF:10159-103A6 76 years, female 92.8

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 137.6
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 104.7
Samples: 4

Max nTPM: 114.8
Min nTPM: 91.8
Sample A Female 114.8
Sample B Female 100.9
Sample C Male 91.8
Sample D Male 111.4
Ventral spinal cord
nTPM: 137.7
Samples: 4

Max nTPM: 158.1
Min nTPM: 110.9
Sample A Female 140.0
Sample B Female 158.1
Sample C Male 141.6
Sample D Male 110.9

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