HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.8 nTPM
HPA:24.8 nTPM
GTEx:43.0 nTPM
FANTOM5:38.0 Scaled Tags Per Million
Pig:16.2 nTPM
Mouse:27.1 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000904Antibody HPA068782
Glial cells LowLow
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.8
Sample id Sample description nTPM
Hippocampus
nTPM: 23.7
1898 Male, age 80, left hemisphere 26.0
2529 Female, age 94, left hemisphere 24.0
1911 Female, age 85, right hemisphere 23.7
1855 Male, age 76, left hemisphere 23.2
2148 Female, age 91, left hemisphere 23.2
2621 Female, age 67, right hemisphere 22.3
Dentate gyrus
nTPM: 24.0
2528 Male, age 74, both hemispheres 26.4
1927 Female, age 91, both hemispheres 24.2
2246 Female, age 85, both hemispheres 23.4
2530 Female, age 94, left hemisphere 23.4
2010 Male, age 76, both hemispheres 23.2
2531 Female, age 67, both hemispheres 23.2
Entorhinal gyrus
nTPM: 24.0
2117 Female, age 91, right hemisphere 24.8
2764 Male, age 80, right hemisphere 24.8
1938 Female, age 85, left hemisphere 23.9
2613 Female, age 94, left hemisphere 23.8
2686 Male, age 75, right hemisphere 23.8
1787 Male, age 76, left hemisphere 23.1
Hippocampus, CA1
nTPM: 24.4
2749 Male, age 80, left hemisphere 26.0
2527 Male, age 74, both hemispheres 25.4
2045 Male, age 76, both hemispheres 23.9
2082 Female, age 91, right hemisphere 23.7
1873 Female, age 85, both hemispheres 23.0
Hippocampus, CA2
nTPM: 24.8
2437 Female, age 94, left hemisphere 25.9
1963 Male, age 80, left hemisphere 25.6
1892 Male, age 76, both hemispheres 25.1
1940 Female, age 85, left hemisphere 24.4
2249 Male, age 74, both hemispheres 24.3
2113 Female, age 91, right hemisphere 23.8
Hippocampus, CA3
nTPM: 24.7
2436 Male, age 74, both hemispheres 25.9
2137 Male, age 80, left hemisphere 25.0
1867 Male, age 76, both hemispheres 24.8
2620 Female, age 94, left hemisphere 24.6
1891 Female, age 85, both hemispheres 24.1
2861 Female, age 67, both hemispheres 23.8
Parahippocampal cortex
nTPM: 23.8
2693 Female, age 94, both hemispheres 24.9
1990 Female, age 91, right hemisphere 24.4
2245 Female, age 91, both hemispheres 24.2
2018 Male, age 76, both hemispheres 24.1
2692 Male, age 74, both hemispheres 24.1
2250 Female, age 67, right hemisphere 23.9
1850 Male, age 80, both hemispheres 23.5
1933 Female, age 85, both hemispheres 23.0
2622 Female, age 67, right hemisphere 23.0
2532 Female, age 72, left hemisphere 22.9
Perirhinal gyrus
nTPM: 24.3
1847 Female, age 91, left hemisphere 26.8
1841 Female, age 85, right hemisphere 24.3
1794 Male, age 80, right hemisphere 24.0
2848 Male, age 76, right hemisphere 23.7
2521 Female, age 94, right hemisphere 22.7
Subiculum
nTPM: 24.5
2438 Female, age 94, left hemisphere 27.6
1977 Female, age 85, both hemispheres 24.7
2619 Male, age 74, both hemispheres 24.6
2042 Male, age 76, both hemispheres 23.6
1901 Male, age 80, both hemispheres 23.5
2729 Female, age 91, right hemisphere 23.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.0
Samples: 197

Max nTPM: 67.8
Min nTPM: 23.6
Std nTPM: 6.4
Median nTPM: 42.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 67.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 63.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 61.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 60.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 60.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 59.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 56.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 55.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 55.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 54.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 54.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.0
FF:10169-103B7 60 years, female 46.0
FF:10153-102I9 76 years, female 30.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 16.2
Min nTPM: 15.6
Sample A Female 16.2
Sample B Female 15.6
Sample C Male 15.9
Sample D Male 15.8
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.7
Min nTPM: 14.6
Sample A Female 14.8
Sample B Female 17.7
Sample C Male 15.1
Sample D Male 14.6
Subiculum
nTPM: 15.9
Samples: 4

Max nTPM: 17.2
Min nTPM: 14.9
Sample A Female 17.2
Sample B Female 16.0
Sample C Male 15.6
Sample D Male 14.9
Ventral hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.7
Sample A Female 14.7
Sample B Female 15.4
Sample C Male 18.0
Sample D Male 16.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 23.7
Min nTPM: 22.0
Sample A Male 22.5
Sample B Male 22.5
Sample C Female 23.7
Sample D Female 22.0
Hippocampal formation
nTPM: 27.1
Samples: 4

Max nTPM: 31.6
Min nTPM: 24.9
Sample A Male 31.6
Sample B Male 25.5
Sample C Female 24.9
Sample D Female 26.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
100144758 Antisense, RP_110421_03_E05, Mouse strain C57BL/6J (56 days, male) 7.4

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