HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:77.3 nTPM
HPA:77.3 nTPM
GTEx:122.5 nTPM
FANTOM5:73.8 Scaled Tags Per Million
Pig:65.4 nTPM
Mouse:200.8 nTPM
Allen mouse:19.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026866
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 77.3
Sample id Sample description nTPM
Hippocampus
nTPM: 68.7
1855 Male, age 76, left hemisphere 81.0
1898 Male, age 80, left hemisphere 76.4
2621 Female, age 67, right hemisphere 75.1
2148 Female, age 91, left hemisphere 64.7
1911 Female, age 85, right hemisphere 61.2
2529 Female, age 94, left hemisphere 53.8
Dentate gyrus
nTPM: 76.3
2530 Female, age 94, left hemisphere 99.3
2010 Male, age 76, both hemispheres 96.0
1927 Female, age 91, both hemispheres 83.3
2531 Female, age 67, both hemispheres 61.0
2528 Male, age 74, both hemispheres 60.5
2246 Female, age 85, both hemispheres 57.5
Entorhinal gyrus
nTPM: 54.8
2613 Female, age 94, left hemisphere 59.0
2117 Female, age 91, right hemisphere 56.3
2764 Male, age 80, right hemisphere 55.3
1787 Male, age 76, left hemisphere 54.4
2686 Male, age 75, right hemisphere 53.2
1938 Female, age 85, left hemisphere 50.8
Hippocampus, CA1
nTPM: 77.3
2749 Male, age 80, left hemisphere 131.1
1873 Female, age 85, both hemispheres 82.3
2527 Male, age 74, both hemispheres 63.2
2045 Male, age 76, both hemispheres 60.9
2082 Female, age 91, right hemisphere 49.1
Hippocampus, CA2
nTPM: 72.8
1963 Male, age 80, left hemisphere 114.8
1892 Male, age 76, both hemispheres 97.9
2437 Female, age 94, left hemisphere 65.0
2249 Male, age 74, both hemispheres 58.0
2113 Female, age 91, right hemisphere 50.7
1940 Female, age 85, left hemisphere 50.6
Hippocampus, CA3
nTPM: 64.9
2137 Male, age 80, left hemisphere 79.4
1867 Male, age 76, both hemispheres 71.5
2620 Female, age 94, left hemisphere 66.8
2861 Female, age 67, both hemispheres 62.3
1891 Female, age 85, both hemispheres 57.1
2436 Male, age 74, both hemispheres 52.3
Parahippocampal cortex
nTPM: 51.7
2693 Female, age 94, both hemispheres 53.9
2018 Male, age 76, both hemispheres 53.3
2245 Female, age 91, both hemispheres 53.3
2692 Male, age 74, both hemispheres 52.1
2250 Female, age 67, right hemisphere 51.8
1990 Female, age 91, right hemisphere 51.7
2532 Female, age 72, left hemisphere 51.7
1850 Male, age 80, both hemispheres 50.8
2622 Female, age 67, right hemisphere 49.9
1933 Female, age 85, both hemispheres 48.6
Perirhinal gyrus
nTPM: 52.6
2521 Female, age 94, right hemisphere 55.2
1794 Male, age 80, right hemisphere 54.0
1841 Female, age 85, right hemisphere 52.6
1847 Female, age 91, left hemisphere 52.2
2848 Male, age 76, right hemisphere 48.9
Subiculum
nTPM: 56.7
1901 Male, age 80, both hemispheres 64.8
2042 Male, age 76, both hemispheres 59.9
2729 Female, age 91, right hemisphere 55.5
1977 Female, age 85, both hemispheres 55.4
2619 Male, age 74, both hemispheres 53.8
2438 Female, age 94, left hemisphere 51.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 122.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 122.5
Samples: 197

Max nTPM: 306.0
Min nTPM: 45.4
Std nTPM: 52.8
Median nTPM: 108.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 306.0
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 284.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 276.8
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 267.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 265.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 263.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 251.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 250.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 246.1
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 244.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 243.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.8
FF:10169-103B7 60 years, female 88.9
FF:10153-102I9 76 years, female 58.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 65.4
Samples: 4

Max nTPM: 87.3
Min nTPM: 43.7
Sample A Female 87.3
Sample B Female 67.8
Sample C Male 62.9
Sample D Male 43.7
Entorhinal cortex
nTPM: 60.3
Samples: 4

Max nTPM: 66.2
Min nTPM: 44.9
Sample A Female 66.2
Sample B Female 63.9
Sample C Male 66.2
Sample D Male 44.9
Subiculum
nTPM: 54.1
Samples: 4

Max nTPM: 71.6
Min nTPM: 46.7
Sample A Female 71.6
Sample B Female 50.7
Sample C Male 47.3
Sample D Male 46.7
Ventral hippocampus
nTPM: 63.1
Samples: 4

Max nTPM: 76.8
Min nTPM: 44.4
Sample A Female 70.1
Sample B Female 44.4
Sample C Male 76.8
Sample D Male 61.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 200.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 178.0
Samples: 4

Max nTPM: 188.8
Min nTPM: 166.0
Sample A Male 182.0
Sample B Male 188.8
Sample C Female 166.0
Sample D Female 175.1
Hippocampal formation
nTPM: 200.8
Samples: 4

Max nTPM: 216.5
Min nTPM: 178.8
Sample A Male 208.3
Sample B Male 199.5
Sample C Female 216.5
Sample D Female 178.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.3
70445532 Antisense, RP_050614_04_A08, Mouse strain C57BL/6J (56 days, male) 19.3

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