HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:35.6 nTPM
HPA:35.6 nTPM
GTEx:23.4 nTPM
FANTOM5:57.8 Scaled Tags Per Million
Pig:7.0 nTPM
Mouse:8.1 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.6
Sample id Sample description nTPM
Hippocampus
nTPM: 35.6
1855 Male, age 76, left hemisphere 45.9
1898 Male, age 80, left hemisphere 42.3
2529 Female, age 94, left hemisphere 33.4
1911 Female, age 85, right hemisphere 31.9
2148 Female, age 91, left hemisphere 31.1
2621 Female, age 67, right hemisphere 29.2
Dentate gyrus
nTPM: 31.8
2010 Male, age 76, both hemispheres 41.5
2528 Male, age 74, both hemispheres 34.5
2530 Female, age 94, left hemisphere 34.5
2246 Female, age 85, both hemispheres 32.2
1927 Female, age 91, both hemispheres 25.1
2531 Female, age 67, both hemispheres 22.9
Entorhinal gyrus
nTPM: 25.6
2117 Female, age 91, right hemisphere 29.7
1938 Female, age 85, left hemisphere 27.4
2764 Male, age 80, right hemisphere 25.3
1787 Male, age 76, left hemisphere 25.2
2686 Male, age 75, right hemisphere 23.6
2613 Female, age 94, left hemisphere 22.4
Hippocampus, CA1
nTPM: 30.7
1873 Female, age 85, both hemispheres 38.4
2527 Male, age 74, both hemispheres 31.1
2749 Male, age 80, left hemisphere 30.3
2082 Female, age 91, right hemisphere 28.6
2045 Male, age 76, both hemispheres 25.1
Hippocampus, CA2
nTPM: 31.9
1963 Male, age 80, left hemisphere 43.2
2249 Male, age 74, both hemispheres 32.3
2113 Female, age 91, right hemisphere 30.6
1940 Female, age 85, left hemisphere 30.2
2437 Female, age 94, left hemisphere 29.3
1892 Male, age 76, both hemispheres 26.0
Hippocampus, CA3
nTPM: 26.9
2436 Male, age 74, both hemispheres 32.6
1891 Female, age 85, both hemispheres 28.5
2861 Female, age 67, both hemispheres 28.1
2137 Male, age 80, left hemisphere 26.4
2620 Female, age 94, left hemisphere 24.6
1867 Male, age 76, both hemispheres 21.0
Parahippocampal cortex
nTPM: 25.0
2692 Male, age 74, both hemispheres 30.1
1933 Female, age 85, both hemispheres 26.7
2250 Female, age 67, right hemisphere 26.1
2018 Male, age 76, both hemispheres 25.9
2622 Female, age 67, right hemisphere 25.5
2245 Female, age 91, both hemispheres 25.0
1990 Female, age 91, right hemisphere 23.8
2532 Female, age 72, left hemisphere 23.5
1850 Male, age 80, both hemispheres 22.7
2693 Female, age 94, both hemispheres 20.9
Perirhinal gyrus
nTPM: 22.1
1794 Male, age 80, right hemisphere 24.4
1841 Female, age 85, right hemisphere 22.7
2521 Female, age 94, right hemisphere 21.9
1847 Female, age 91, left hemisphere 21.8
2848 Male, age 76, right hemisphere 19.9
Subiculum
nTPM: 27.9
2619 Male, age 74, both hemispheres 31.9
2729 Female, age 91, right hemisphere 31.9
2042 Male, age 76, both hemispheres 27.2
2438 Female, age 94, left hemisphere 26.6
1901 Male, age 80, both hemispheres 25.5
1977 Female, age 85, both hemispheres 24.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.4
Samples: 197

Max nTPM: 44.3
Min nTPM: 6.0
Std nTPM: 6.7
Median nTPM: 23.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 44.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 44.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 42.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 41.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 38.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 35.6
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 34.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 34.0
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 33.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 33.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 33.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.8
FF:10169-103B7 60 years, female 61.7
FF:10153-102I9 76 years, female 53.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.1
Samples: 4

Max nTPM: 7.4
Min nTPM: 3.5
Sample A Female 4.9
Sample B Female 4.4
Sample C Male 7.4
Sample D Male 3.5
Entorhinal cortex
nTPM: 7.1
Samples: 4

Max nTPM: 8.3
Min nTPM: 5.3
Sample A Female 7.2
Sample B Female 7.4
Sample C Male 8.3
Sample D Male 5.3
Subiculum
nTPM: 5.9
Samples: 4

Max nTPM: 6.3
Min nTPM: 5.5
Sample A Female 6.3
Sample B Female 5.5
Sample C Male 5.7
Sample D Male 6.0
Ventral hippocampus
nTPM: 5.2
Samples: 4

Max nTPM: 7.0
Min nTPM: 4.3
Sample A Female 4.6
Sample B Female 4.3
Sample C Male 7.0
Sample D Male 4.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 10.3
Min nTPM: 6.9
Sample A Male 6.9
Sample B Male 7.2
Sample C Female 7.9
Sample D Female 10.3
Hippocampal formation
nTPM: 3.9
Samples: 4

Max nTPM: 6.2
Min nTPM: 2.6
Sample A Male 3.4
Sample B Male 2.6
Sample C Female 3.5
Sample D Female 6.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
2066 Antisense, RP_040526_01_A02, Mouse strain C57BL/6J (56 days, male) 0.2
2065 Antisense, RP_040526_01_A02, Mouse strain C57BL/6J (56 days, male) 0.2
70795430 Antisense, RP_050712_01_E09, Mouse strain C57BL/6J (56 days, male) 0.1

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