HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.7 nTPM
HPA:42.7 nTPM
GTEx:36.4 nTPM
FANTOM5:23.1 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:1.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055223Antibody HPA076419
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.7
Sample id Sample description nTPM
Hippocampus
nTPM: 40.1
2529 Female, age 94, left hemisphere 41.6
1898 Male, age 80, left hemisphere 40.9
1911 Female, age 85, right hemisphere 40.4
2148 Female, age 91, left hemisphere 39.9
2621 Female, age 67, right hemisphere 39.8
1855 Male, age 76, left hemisphere 38.1
Dentate gyrus
nTPM: 40.2
2530 Female, age 94, left hemisphere 48.8
2531 Female, age 67, both hemispheres 40.3
2010 Male, age 76, both hemispheres 40.2
2528 Male, age 74, both hemispheres 37.9
2246 Female, age 85, both hemispheres 37.7
1927 Female, age 91, both hemispheres 36.2
Entorhinal gyrus
nTPM: 42.0
2117 Female, age 91, right hemisphere 46.3
2686 Male, age 75, right hemisphere 45.4
2764 Male, age 80, right hemisphere 43.7
2613 Female, age 94, left hemisphere 39.6
1938 Female, age 85, left hemisphere 38.8
1787 Male, age 76, left hemisphere 37.9
Hippocampus, CA1
nTPM: 37.4
1873 Female, age 85, both hemispheres 39.0
2527 Male, age 74, both hemispheres 37.9
2082 Female, age 91, right hemisphere 37.3
2749 Male, age 80, left hemisphere 36.6
2045 Male, age 76, both hemispheres 36.3
Hippocampus, CA2
nTPM: 39.7
1963 Male, age 80, left hemisphere 42.2
2437 Female, age 94, left hemisphere 41.1
1940 Female, age 85, left hemisphere 40.2
2249 Male, age 74, both hemispheres 39.6
2113 Female, age 91, right hemisphere 38.5
1892 Male, age 76, both hemispheres 36.8
Hippocampus, CA3
nTPM: 37.3
1891 Female, age 85, both hemispheres 42.1
2861 Female, age 67, both hemispheres 38.6
1867 Male, age 76, both hemispheres 37.3
2620 Female, age 94, left hemisphere 36.0
2436 Male, age 74, both hemispheres 35.3
2137 Male, age 80, left hemisphere 34.7
Parahippocampal cortex
nTPM: 39.8
2532 Female, age 72, left hemisphere 43.3
1990 Female, age 91, right hemisphere 41.1
2692 Male, age 74, both hemispheres 41.0
2018 Male, age 76, both hemispheres 40.9
2622 Female, age 67, right hemisphere 40.4
1850 Male, age 80, both hemispheres 39.9
1933 Female, age 85, both hemispheres 39.9
2245 Female, age 91, both hemispheres 39.0
2693 Female, age 94, both hemispheres 36.4
2250 Female, age 67, right hemisphere 36.2
Perirhinal gyrus
nTPM: 37.6
1794 Male, age 80, right hemisphere 38.8
2848 Male, age 76, right hemisphere 38.8
1841 Female, age 85, right hemisphere 37.8
1847 Female, age 91, left hemisphere 37.2
2521 Female, age 94, right hemisphere 35.7
Subiculum
nTPM: 42.7
2042 Male, age 76, both hemispheres 44.3
1901 Male, age 80, both hemispheres 44.2
2438 Female, age 94, left hemisphere 44.1
1977 Female, age 85, both hemispheres 42.9
2729 Female, age 91, right hemisphere 41.3
2619 Male, age 74, both hemispheres 39.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.4
Samples: 197

Max nTPM: 179.1
Min nTPM: 4.5
Std nTPM: 20.2
Median nTPM: 31.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 179.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 115.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 103.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 99.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 90.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 76.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 75.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 75.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 73.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 70.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 69.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.1
FF:10169-103B7 60 years, female 27.2
FF:10153-102I9 76 years, female 19.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.7
Samples: 4

Max nTPM: 14.1
Min nTPM: 8.6
Sample A Female 14.1
Sample B Female 12.5
Sample C Male 11.6
Sample D Male 8.6
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 9.7
Sample A Female 12.1
Sample B Female 13.5
Sample C Male 17.1
Sample D Male 9.7
Subiculum
nTPM: 15.8
Samples: 4

Max nTPM: 18.3
Min nTPM: 14.1
Sample A Female 18.3
Sample B Female 16.0
Sample C Male 14.9
Sample D Male 14.1
Ventral hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 18.4
Min nTPM: 12.4
Sample A Female 13.4
Sample B Female 12.4
Sample C Male 18.4
Sample D Male 12.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.1
Samples: 4

Max nTPM: 1.6
Min nTPM: 0.7
Sample A Male 1.1
Sample B Male 1.0
Sample C Female 0.7
Sample D Female 1.6
Hippocampal formation
nTPM: 0.2
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.0
Sample A Male 0.6
Sample B Male 0.0
Sample C Female 0.1
Sample D Female 0.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71381121 Antisense, RP_050510_02_D03, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.