HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.7 nTPM
HPA:45.7 nTPM
GTEx:54.0 nTPM
FANTOM5:28.1 Scaled Tags Per Million
Pig:3.9 nTPM
Mouse:66.7 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029876
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.7
Sample id Sample description nTPM
Hippocampus
nTPM: 45.7
2529 Female, age 94, left hemisphere 57.3
2148 Female, age 91, left hemisphere 49.2
1855 Male, age 76, left hemisphere 45.0
1898 Male, age 80, left hemisphere 41.2
1911 Female, age 85, right hemisphere 41.2
2621 Female, age 67, right hemisphere 40.3
Dentate gyrus
nTPM: 38.8
2528 Male, age 74, both hemispheres 46.6
2530 Female, age 94, left hemisphere 39.7
2246 Female, age 85, both hemispheres 37.6
1927 Female, age 91, both hemispheres 37.4
2010 Male, age 76, both hemispheres 36.2
2531 Female, age 67, both hemispheres 35.5
Entorhinal gyrus
nTPM: 40.0
2117 Female, age 91, right hemisphere 52.6
2686 Male, age 75, right hemisphere 40.6
1938 Female, age 85, left hemisphere 38.3
2613 Female, age 94, left hemisphere 38.0
2764 Male, age 80, right hemisphere 37.2
1787 Male, age 76, left hemisphere 33.5
Hippocampus, CA1
nTPM: 39.7
2527 Male, age 74, both hemispheres 48.8
1873 Female, age 85, both hemispheres 40.2
2082 Female, age 91, right hemisphere 38.6
2045 Male, age 76, both hemispheres 37.6
2749 Male, age 80, left hemisphere 33.1
Hippocampus, CA2
nTPM: 37.1
2113 Female, age 91, right hemisphere 43.8
2437 Female, age 94, left hemisphere 40.8
2249 Male, age 74, both hemispheres 39.5
1963 Male, age 80, left hemisphere 37.7
1940 Female, age 85, left hemisphere 31.0
1892 Male, age 76, both hemispheres 30.0
Hippocampus, CA3
nTPM: 37.8
2620 Female, age 94, left hemisphere 40.9
1891 Female, age 85, both hemispheres 40.4
2861 Female, age 67, both hemispheres 38.9
2436 Male, age 74, both hemispheres 38.8
1867 Male, age 76, both hemispheres 34.4
2137 Male, age 80, left hemisphere 33.7
Parahippocampal cortex
nTPM: 37.5
2250 Female, age 67, right hemisphere 47.1
2692 Male, age 74, both hemispheres 44.1
2622 Female, age 67, right hemisphere 40.0
1990 Female, age 91, right hemisphere 39.4
1933 Female, age 85, both hemispheres 38.5
2245 Female, age 91, both hemispheres 38.1
2018 Male, age 76, both hemispheres 35.1
1850 Male, age 80, both hemispheres 34.0
2693 Female, age 94, both hemispheres 30.2
2532 Female, age 72, left hemisphere 28.3
Perirhinal gyrus
nTPM: 34.2
1847 Female, age 91, left hemisphere 42.3
1841 Female, age 85, right hemisphere 34.1
1794 Male, age 80, right hemisphere 33.6
2521 Female, age 94, right hemisphere 32.2
2848 Male, age 76, right hemisphere 28.8
Subiculum
nTPM: 40.7
2729 Female, age 91, right hemisphere 54.5
2619 Male, age 74, both hemispheres 43.5
2042 Male, age 76, both hemispheres 38.4
2438 Female, age 94, left hemisphere 38.0
1977 Female, age 85, both hemispheres 35.5
1901 Male, age 80, both hemispheres 34.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.0
Samples: 197

Max nTPM: 126.5
Min nTPM: 7.3
Std nTPM: 25.7
Median nTPM: 51.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 126.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 125.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 118.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 118.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 116.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 115.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 115.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 113.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 109.8
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 109.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 109.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.1
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 22.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.1
Samples: 4

Max nTPM: 4.5
Min nTPM: 1.0
Sample A Female 1.0
Sample B Female 1.5
Sample C Male 4.5
Sample D Male 1.3
Entorhinal cortex
nTPM: 2.9
Samples: 4

Max nTPM: 4.8
Min nTPM: 2.1
Sample A Female 2.5
Sample B Female 2.2
Sample C Male 4.8
Sample D Male 2.1
Subiculum
nTPM: 3.9
Samples: 4

Max nTPM: 5.4
Min nTPM: 2.4
Sample A Female 5.4
Sample B Female 3.5
Sample C Male 2.4
Sample D Male 4.3
Ventral hippocampus
nTPM: 1.5
Samples: 4

Max nTPM: 2.4
Min nTPM: 0.7
Sample A Female 1.1
Sample B Female 1.8
Sample C Male 2.4
Sample D Male 0.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.7
Samples: 4

Max nTPM: 74.4
Min nTPM: 63.6
Sample A Male 64.6
Sample B Male 64.3
Sample C Female 74.4
Sample D Female 63.6
Hippocampal formation
nTPM: 66.3
Samples: 4

Max nTPM: 72.3
Min nTPM: 59.0
Sample A Male 71.0
Sample B Male 62.9
Sample C Female 59.0
Sample D Female 72.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
112648182 Antisense, RP_080912_05_A07, Mouse strain C57BL/6J (56 days, male) 0.6
1475 Antisense, RP_Baylor_103226, Mouse strain C57BL/6J (56 days, male) 0.1

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