HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:2976.3 nTPM
HPA:2976.3 nTPM
GTEx:2738.0 nTPM
FANTOM5:2977.2 Scaled Tags Per Million
Pig:1041.7 nTPM
Mouse:1967.6 nTPM
Allen mouse:27.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013143Antibody CAB000118
Glial cells MediumNot detected
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 2976.3
Sample id Sample description nTPM
Hippocampus
nTPM: 2976.3
2148 Female, age 91, left hemisphere 3356.0
2529 Female, age 94, left hemisphere 3043.6
2621 Female, age 67, right hemisphere 3012.0
1911 Female, age 85, right hemisphere 2970.4
1898 Male, age 80, left hemisphere 2884.8
1855 Male, age 76, left hemisphere 2590.8
Dentate gyrus
nTPM: 2766.8
2528 Male, age 74, both hemispheres 3060.3
2246 Female, age 85, both hemispheres 3029.8
1927 Female, age 91, both hemispheres 2827.9
2530 Female, age 94, left hemisphere 2757.6
2531 Female, age 67, both hemispheres 2545.4
2010 Male, age 76, both hemispheres 2379.5
Entorhinal gyrus
nTPM: 2734.5
2117 Female, age 91, right hemisphere 3497.7
1938 Female, age 85, left hemisphere 3185.1
2686 Male, age 75, right hemisphere 2532.3
2764 Male, age 80, right hemisphere 2459.6
1787 Male, age 76, left hemisphere 2411.2
2613 Female, age 94, left hemisphere 2321.0
Hippocampus, CA1
nTPM: 2707.4
2527 Male, age 74, both hemispheres 3255.4
2749 Male, age 80, left hemisphere 2779.8
1873 Female, age 85, both hemispheres 2722.1
2082 Female, age 91, right hemisphere 2462.9
2045 Male, age 76, both hemispheres 2316.6
Hippocampus, CA2
nTPM: 2716.0
2249 Male, age 74, both hemispheres 3076.3
2113 Female, age 91, right hemisphere 2806.4
1940 Female, age 85, left hemisphere 2793.8
1963 Male, age 80, left hemisphere 2665.6
2437 Female, age 94, left hemisphere 2645.9
1892 Male, age 76, both hemispheres 2308.2
Hippocampus, CA3
nTPM: 2768.9
2436 Male, age 74, both hemispheres 3063.5
2861 Female, age 67, both hemispheres 2968.6
2620 Female, age 94, left hemisphere 2746.1
2137 Male, age 80, left hemisphere 2705.6
1891 Female, age 85, both hemispheres 2657.3
1867 Male, age 76, both hemispheres 2472.4
Parahippocampal cortex
nTPM: 2692.6
1933 Female, age 85, both hemispheres 3148.8
2692 Male, age 74, both hemispheres 2954.1
2245 Female, age 91, both hemispheres 2902.6
2622 Female, age 67, right hemisphere 2785.5
2250 Female, age 67, right hemisphere 2753.7
1990 Female, age 91, right hemisphere 2582.2
2532 Female, age 72, left hemisphere 2526.2
1850 Male, age 80, both hemispheres 2500.0
2693 Female, age 94, both hemispheres 2406.8
2018 Male, age 76, both hemispheres 2366.5
Perirhinal gyrus
nTPM: 2512.9
1794 Male, age 80, right hemisphere 2792.5
1847 Female, age 91, left hemisphere 2588.5
1841 Female, age 85, right hemisphere 2511.9
2521 Female, age 94, right hemisphere 2480.5
2848 Male, age 76, right hemisphere 2190.9
Subiculum
nTPM: 2734.7
2729 Female, age 91, right hemisphere 3157.7
2619 Male, age 74, both hemispheres 2987.1
1977 Female, age 85, both hemispheres 2629.2
2438 Female, age 94, left hemisphere 2624.7
1901 Male, age 80, both hemispheres 2542.7
2042 Male, age 76, both hemispheres 2466.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2738.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2738.0
Samples: 197

Max nTPM: 10839.2
Min nTPM: 479.4
Std nTPM: 1504.2
Median nTPM: 2368.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 10839.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 8207.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 6894.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 6893.7
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 6882.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 6642.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 6430.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 6345.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 5973.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 5716.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 5705.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 2977.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2977.2
FF:10169-103B7 60 years, female 3082.5
FF:10153-102I9 76 years, female 2872.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1041.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1041.7
Samples: 4

Max nTPM: 1364.9
Min nTPM: 741.8
Sample A Female 1364.9
Sample B Female 875.7
Sample C Male 1184.2
Sample D Male 741.8
Entorhinal cortex
nTPM: 732.7
Samples: 4

Max nTPM: 929.9
Min nTPM: 448.7
Sample A Female 646.2
Sample B Female 929.9
Sample C Male 905.9
Sample D Male 448.7
Subiculum
nTPM: 912.4
Samples: 4

Max nTPM: 1192.9
Min nTPM: 693.1
Sample A Female 1192.9
Sample B Female 936.7
Sample C Male 693.1
Sample D Male 827.0
Ventral hippocampus
nTPM: 935.0
Samples: 4

Max nTPM: 1168.1
Min nTPM: 790.9
Sample A Female 962.9
Sample B Female 818.2
Sample C Male 1168.1
Sample D Male 790.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1967.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1830.0
Samples: 4

Max nTPM: 1941.9
Min nTPM: 1722.7
Sample A Male 1886.0
Sample B Male 1769.4
Sample C Female 1941.9
Sample D Female 1722.7
Hippocampal formation
nTPM: 1967.7
Samples: 4

Max nTPM: 2101.1
Min nTPM: 1842.1
Sample A Male 1965.0
Sample B Male 1842.1
Sample C Female 1962.4
Sample D Female 2101.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 27.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.6
75496213 Antisense, RP_060523_03_G08, Mouse strain C57BL/6J (56 days, male) 29.5
75496215 Antisense, RP_060523_03_H08, Mouse strain C57BL/6J (56 days, male) 28.5
75457613 Antisense, RP_060523_03_H08, Mouse strain C57BL/6J (56 days, male) 28.4
75457611 Antisense, RP_060523_03_F08, Mouse strain C57BL/6J (56 days, male) 27.5
75457612 Antisense, RP_060523_03_G08, Mouse strain C57BL/6J (56 days, male) 27.3
75496720 Antisense, RP_060523_03_E08, Mouse strain C57BL/6J (56 days, male) 27.2
75496212 Antisense, RP_060523_03_F08, Mouse strain C57BL/6J (56 days, male) 27.0
75457610 Antisense, RP_060523_03_E08, Mouse strain C57BL/6J (56 days, male) 26.8
75496721 Antisense, RP_060523_03_F08, Mouse strain C57BL/6J (56 days, male) 26.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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