HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:64.1 nTPM
HPA:64.1 nTPM
GTEx:64.1 nTPM
FANTOM5:80.5 Scaled Tags Per Million
Pig:26.9 nTPM
Mouse:63.3 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012863
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.1
Sample id Sample description nTPM
Hippocampus
nTPM: 60.4
1898 Male, age 80, left hemisphere 67.0
1855 Male, age 76, left hemisphere 65.6
2148 Female, age 91, left hemisphere 60.3
2621 Female, age 67, right hemisphere 60.2
1911 Female, age 85, right hemisphere 56.0
2529 Female, age 94, left hemisphere 53.0
Dentate gyrus
nTPM: 62.5
2010 Male, age 76, both hemispheres 69.7
1927 Female, age 91, both hemispheres 68.8
2530 Female, age 94, left hemisphere 60.6
2528 Male, age 74, both hemispheres 59.8
2531 Female, age 67, both hemispheres 58.5
2246 Female, age 85, both hemispheres 57.7
Entorhinal gyrus
nTPM: 55.9
2764 Male, age 80, right hemisphere 58.6
1787 Male, age 76, left hemisphere 58.1
2613 Female, age 94, left hemisphere 57.8
1938 Female, age 85, left hemisphere 56.6
2117 Female, age 91, right hemisphere 56.2
2686 Male, age 75, right hemisphere 47.9
Hippocampus, CA1
nTPM: 64.1
2045 Male, age 76, both hemispheres 74.2
1873 Female, age 85, both hemispheres 69.5
2749 Male, age 80, left hemisphere 69.0
2527 Male, age 74, both hemispheres 54.6
2082 Female, age 91, right hemisphere 53.3
Hippocampus, CA2
nTPM: 61.3
1892 Male, age 76, both hemispheres 77.7
1963 Male, age 80, left hemisphere 71.8
2437 Female, age 94, left hemisphere 57.8
1940 Female, age 85, left hemisphere 55.2
2113 Female, age 91, right hemisphere 53.4
2249 Male, age 74, both hemispheres 51.9
Hippocampus, CA3
nTPM: 60.8
2620 Female, age 94, left hemisphere 69.5
1867 Male, age 76, both hemispheres 67.6
1891 Female, age 85, both hemispheres 60.6
2137 Male, age 80, left hemisphere 57.7
2436 Male, age 74, both hemispheres 55.6
2861 Female, age 67, both hemispheres 54.0
Parahippocampal cortex
nTPM: 55.0
1850 Male, age 80, both hemispheres 60.7
2018 Male, age 76, both hemispheres 57.0
2250 Female, age 67, right hemisphere 56.8
1990 Female, age 91, right hemisphere 56.5
1933 Female, age 85, both hemispheres 56.1
2693 Female, age 94, both hemispheres 55.1
2245 Female, age 91, both hemispheres 54.0
2532 Female, age 72, left hemisphere 53.8
2692 Male, age 74, both hemispheres 52.1
2622 Female, age 67, right hemisphere 48.2
Perirhinal gyrus
nTPM: 61.0
1847 Female, age 91, left hemisphere 64.5
1794 Male, age 80, right hemisphere 61.6
2521 Female, age 94, right hemisphere 60.9
1841 Female, age 85, right hemisphere 59.7
2848 Male, age 76, right hemisphere 58.2
Subiculum
nTPM: 55.6
2729 Female, age 91, right hemisphere 59.2
1977 Female, age 85, both hemispheres 56.2
2619 Male, age 74, both hemispheres 56.0
1901 Male, age 80, both hemispheres 55.1
2042 Male, age 76, both hemispheres 54.6
2438 Female, age 94, left hemisphere 52.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.1
Samples: 197

Max nTPM: 148.3
Min nTPM: 30.8
Std nTPM: 24.1
Median nTPM: 58.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 148.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 138.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 133.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 133.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 127.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 125.5
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 124.1
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 123.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 123.6
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 123.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 120.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.5
FF:10169-103B7 60 years, female 101.4
FF:10153-102I9 76 years, female 59.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.9
Samples: 4

Max nTPM: 31.5
Min nTPM: 19.9
Sample A Female 30.3
Sample B Female 31.5
Sample C Male 19.9
Sample D Male 25.7
Entorhinal cortex
nTPM: 20.2
Samples: 4

Max nTPM: 21.9
Min nTPM: 16.4
Sample A Female 21.6
Sample B Female 20.9
Sample C Male 21.9
Sample D Male 16.4
Subiculum
nTPM: 20.4
Samples: 4

Max nTPM: 25.0
Min nTPM: 16.6
Sample A Female 25.0
Sample B Female 19.0
Sample C Male 20.9
Sample D Male 16.6
Ventral hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 32.7
Min nTPM: 18.0
Sample A Female 27.3
Sample B Female 18.0
Sample C Male 32.7
Sample D Male 22.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.4
Samples: 4

Max nTPM: 62.9
Min nTPM: 52.3
Sample A Male 52.3
Sample B Male 56.1
Sample C Female 54.4
Sample D Female 62.9
Hippocampal formation
nTPM: 63.4
Samples: 4

Max nTPM: 69.5
Min nTPM: 60.3
Sample A Male 62.7
Sample B Male 60.3
Sample C Female 69.5
Sample D Female 60.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
69837580 Antisense, RP_050222_01_H02, Mouse strain C57BL/6J (56 days, male) 3.8

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