AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		136.192
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:117.7 nTPM
HPA:117.7 nTPM
GTEx:96.5 nTPM
FANTOM5:236.7 Scaled Tags Per Million
Pig:49.6 nTPM
Mouse:89.2 nTPM
Allen mouse:20.0 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA037536
Amygdala mean intensity 136.192
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 79.155
Basal medial amygdaloid nucleus 97.572
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 105.857
Cortical amygdala 136.192
Central amygdala 92.637
Medial amygdaloid nucleus 105.827

AMYGDALA - HPA Brain RNA-seq
Max nTPM 117.7
Sample id Sample description nTPM
Amygdala
nTPM: 61.7
1987 Female, age 91, left hemisphere 78.9
2517 Female, age 94, left hemisphere 67.5
2514 Male, age 75, right hemisphere 60.8
2814 Male, age 76, right hemisphere 59.7
2695 Female, age 67, right hemisphere 41.5
Basal amygdala
nTPM: 68.8
2243 Female, age 91, right hemisphere 90.3
2685 Female, age 94, left hemisphere 89.9
2110 Male, age 80, left hemisphere 72.4
1955 Male, age 76, both hemispheres 62.1
2609 Male, age 75, right hemisphere 61.1
2827 Female, age 67, right hemisphere 37.1
Central amygdala
nTPM: 69.7
2239 Male, age 80, left hemisphere 85.9
2701 Female, age 91, right hemisphere 79.6
2826 Female, age 94, left hemisphere 68.5
2515 Male, age 75, right hemisphere 61.1
1905 Male, age 76, both hemispheres 53.6
Corticomedial amygdala
nTPM: 73.5
2242 Female, age 91, right hemisphere 96.9
2829 Male, age 80, left hemisphere 95.5
2429 Female, age 94, left hemisphere 79.3
2240 Male, age 76, both hemispheres 62.5
2428 Male, age 75, right hemisphere 57.3
2535 Female, age 67, right hemisphere 49.2
Lateral amygdala
nTPM: 63.8
2534 Female, age 94, left hemisphere 87.1
2255 Female, age 91, right hemisphere 84.9
1883 Male, age 76, both hemispheres 62.7
2256 Male, age 80, left hemisphere 61.6
2516 Male, age 75, right hemisphere 57.7
2830 Female, age 67, right hemisphere 28.7
Stria terminalis, bed nucleus
nTPM: 117.7
1974 Female, age 91, both hemispheres 128.3
2486 Female, age 94, both hemispheres 117.5
2201 Male, age 74, unknown 107.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 96.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 96.5
Samples: 152

Max nTPM: 188.7
Min nTPM: 35.5
Std nTPM: 28.6
Median nTPM: 92.8
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 188.7
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 173.3
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 163.6
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 159.4
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 158.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 153.5
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 148.3
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 147.7
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 147.2
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 146.0
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 145.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 236.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 236.7
FF:10151-102I7 76 years, female 236.7

AMYGDALA - Pig RNA-seqi
Average nTPM 49.6
Pig sample Sample description nTPM
Amygdala
nTPM: 49.6
Samples: 4

Max nTPM: 66.7
Min nTPM: 35.1
Sample A Female 66.7
Sample B Female 35.1
Sample C Male 45.9
Sample D Male 50.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 89.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 89.2
Samples: 4

Max nTPM: 108.9
Min nTPM: 71.2
Sample A Male 108.9
Sample B Male 86.0
Sample C Female 71.2
Sample D Female 90.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 20.0
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 20.0
77620309 Antisense, RP_070205_01_A10, Mouse strain C57BL/6J (56 days, male) 20.7
355883 Antisense, RP_040617_01_F01, Mouse strain C57BL/6J (56 days, male) 19.3
293903 Antisense, RP_040617_01_F01, Mouse strain C57BL/6J (56 days, male) 18.4
77869130 Antisense, RP_070205_01_A10, Mouse strain C57BL/6J (56 days, male) 13.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.