HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:188.8 nTPM
HPA:188.8 nTPM
GTEx:231.2 nTPM
FANTOM5:611.8 Scaled Tags Per Million
Pig:88.0 nTPM
Mouse:37.0 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045105
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 188.8
Sample id Sample description nTPM
Hippocampus
nTPM: 174.5
1898 Male, age 80, left hemisphere 183.9
1855 Male, age 76, left hemisphere 178.9
2621 Female, age 67, right hemisphere 175.4
1911 Female, age 85, right hemisphere 171.6
2529 Female, age 94, left hemisphere 170.5
2148 Female, age 91, left hemisphere 166.9
Dentate gyrus
nTPM: 175.8
1927 Female, age 91, both hemispheres 185.4
2246 Female, age 85, both hemispheres 179.3
2530 Female, age 94, left hemisphere 178.4
2010 Male, age 76, both hemispheres 174.6
2531 Female, age 67, both hemispheres 171.4
2528 Male, age 74, both hemispheres 165.7
Entorhinal gyrus
nTPM: 176.8
1938 Female, age 85, left hemisphere 189.0
1787 Male, age 76, left hemisphere 178.0
2613 Female, age 94, left hemisphere 178.0
2764 Male, age 80, right hemisphere 175.1
2117 Female, age 91, right hemisphere 171.3
2686 Male, age 75, right hemisphere 169.5
Hippocampus, CA1
nTPM: 180.0
2749 Male, age 80, left hemisphere 200.6
1873 Female, age 85, both hemispheres 182.8
2527 Male, age 74, both hemispheres 178.4
2045 Male, age 76, both hemispheres 174.3
2082 Female, age 91, right hemisphere 164.1
Hippocampus, CA2
nTPM: 175.7
1892 Male, age 76, both hemispheres 195.7
1963 Male, age 80, left hemisphere 178.7
2437 Female, age 94, left hemisphere 173.9
1940 Female, age 85, left hemisphere 171.2
2249 Male, age 74, both hemispheres 170.8
2113 Female, age 91, right hemisphere 163.6
Hippocampus, CA3
nTPM: 175.9
2137 Male, age 80, left hemisphere 191.4
1867 Male, age 76, both hemispheres 181.0
1891 Female, age 85, both hemispheres 176.1
2436 Male, age 74, both hemispheres 172.1
2620 Female, age 94, left hemisphere 170.1
2861 Female, age 67, both hemispheres 164.6
Parahippocampal cortex
nTPM: 178.5
1850 Male, age 80, both hemispheres 190.7
2245 Female, age 91, both hemispheres 190.2
1933 Female, age 85, both hemispheres 187.0
2532 Female, age 72, left hemisphere 183.3
2250 Female, age 67, right hemisphere 179.8
1990 Female, age 91, right hemisphere 179.7
2693 Female, age 94, both hemispheres 175.2
2018 Male, age 76, both hemispheres 170.4
2692 Male, age 74, both hemispheres 167.3
2622 Female, age 67, right hemisphere 161.1
Perirhinal gyrus
nTPM: 188.8
1841 Female, age 85, right hemisphere 194.1
2521 Female, age 94, right hemisphere 190.7
1847 Female, age 91, left hemisphere 188.5
1794 Male, age 80, right hemisphere 187.9
2848 Male, age 76, right hemisphere 182.9
Subiculum
nTPM: 174.9
2438 Female, age 94, left hemisphere 190.0
1977 Female, age 85, both hemispheres 182.7
1901 Male, age 80, both hemispheres 182.2
2042 Male, age 76, both hemispheres 168.8
2619 Male, age 74, both hemispheres 167.6
2729 Female, age 91, right hemisphere 157.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 231.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 231.2
Samples: 197

Max nTPM: 462.6
Min nTPM: 84.7
Std nTPM: 68.5
Median nTPM: 229.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 462.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 416.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 380.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 376.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 372.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 369.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 358.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 355.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 354.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 349.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 348.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 611.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 611.8
FF:10169-103B7 60 years, female 841.2
FF:10153-102I9 76 years, female 382.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 88.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 86.9
Samples: 4

Max nTPM: 103.6
Min nTPM: 71.2
Sample A Female 103.6
Sample B Female 81.4
Sample C Male 91.4
Sample D Male 71.2
Entorhinal cortex
nTPM: 77.9
Samples: 4

Max nTPM: 88.8
Min nTPM: 70.3
Sample A Female 74.8
Sample B Female 88.8
Sample C Male 77.5
Sample D Male 70.3
Subiculum
nTPM: 85.1
Samples: 4

Max nTPM: 107.4
Min nTPM: 68.2
Sample A Female 107.4
Sample B Female 83.0
Sample C Male 81.8
Sample D Male 68.2
Ventral hippocampus
nTPM: 88.0
Samples: 4

Max nTPM: 106.0
Min nTPM: 70.3
Sample A Female 87.2
Sample B Female 70.3
Sample C Male 106.0
Sample D Male 88.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.0
Samples: 4

Max nTPM: 41.4
Min nTPM: 30.6
Sample A Male 30.6
Sample B Male 38.0
Sample C Female 38.0
Sample D Female 41.4
Hippocampal formation
nTPM: 32.5
Samples: 4

Max nTPM: 39.8
Min nTPM: 25.5
Sample A Male 39.8
Sample B Male 29.5
Sample C Female 25.5
Sample D Female 35.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
69201534 Antisense, RP_050317_03_B02, Mouse strain C57BL/6J (56 days, male) 3.8

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