HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:272.4 nTPM
HPA:272.4 nTPM
GTEx:185.6 nTPM
FANTOM5:561.1 Scaled Tags Per Million
Pig:220.2 nTPM
Mouse:410.5 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 272.4
Sample id Sample description nTPM
Hippocampus
nTPM: 245.4
1898 Male, age 80, left hemisphere 266.0
1911 Female, age 85, right hemisphere 256.7
2621 Female, age 67, right hemisphere 250.4
2529 Female, age 94, left hemisphere 236.3
1855 Male, age 76, left hemisphere 232.4
2148 Female, age 91, left hemisphere 230.4
Dentate gyrus
nTPM: 239.8
1927 Female, age 91, both hemispheres 250.3
2246 Female, age 85, both hemispheres 240.2
2530 Female, age 94, left hemisphere 238.5
2010 Male, age 76, both hemispheres 236.9
2528 Male, age 74, both hemispheres 236.6
2531 Female, age 67, both hemispheres 236.4
Entorhinal gyrus
nTPM: 253.3
2764 Male, age 80, right hemisphere 275.1
1938 Female, age 85, left hemisphere 270.9
2613 Female, age 94, left hemisphere 255.7
2686 Male, age 75, right hemisphere 249.9
1787 Male, age 76, left hemisphere 244.5
2117 Female, age 91, right hemisphere 223.9
Hippocampus, CA1
nTPM: 272.4
2749 Male, age 80, left hemisphere 360.7
1873 Female, age 85, both hemispheres 268.5
2527 Male, age 74, both hemispheres 251.8
2082 Female, age 91, right hemisphere 247.4
2045 Male, age 76, both hemispheres 233.7
Hippocampus, CA2
nTPM: 249.5
1963 Male, age 80, left hemisphere 283.6
2249 Male, age 74, both hemispheres 260.8
2113 Female, age 91, right hemisphere 246.6
1940 Female, age 85, left hemisphere 240.9
2437 Female, age 94, left hemisphere 234.9
1892 Male, age 76, both hemispheres 230.3
Hippocampus, CA3
nTPM: 265.8
2137 Male, age 80, left hemisphere 320.2
2436 Male, age 74, both hemispheres 290.8
2861 Female, age 67, both hemispheres 257.5
2620 Female, age 94, left hemisphere 245.4
1891 Female, age 85, both hemispheres 242.3
1867 Male, age 76, both hemispheres 238.7
Parahippocampal cortex
nTPM: 255.6
1850 Male, age 80, both hemispheres 276.3
1933 Female, age 85, both hemispheres 274.8
2532 Female, age 72, left hemisphere 261.6
2622 Female, age 67, right hemisphere 257.5
2245 Female, age 91, both hemispheres 253.8
2693 Female, age 94, both hemispheres 253.4
2250 Female, age 67, right hemisphere 253.3
1990 Female, age 91, right hemisphere 251.7
2018 Male, age 76, both hemispheres 239.5
2692 Male, age 74, both hemispheres 234.0
Perirhinal gyrus
nTPM: 270.5
1841 Female, age 85, right hemisphere 296.3
1794 Male, age 80, right hemisphere 286.2
1847 Female, age 91, left hemisphere 274.4
2521 Female, age 94, right hemisphere 256.3
2848 Male, age 76, right hemisphere 239.1
Subiculum
nTPM: 240.8
1901 Male, age 80, both hemispheres 268.2
1977 Female, age 85, both hemispheres 258.9
2619 Male, age 74, both hemispheres 241.8
2042 Male, age 76, both hemispheres 231.0
2438 Female, age 94, left hemisphere 223.5
2729 Female, age 91, right hemisphere 221.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 185.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 185.6
Samples: 197

Max nTPM: 499.8
Min nTPM: 63.0
Std nTPM: 59.9
Median nTPM: 173.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 499.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 446.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 428.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 344.9
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 341.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 334.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 315.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 296.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 294.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 278.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 269.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 561.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 561.1
FF:10169-103B7 60 years, female 642.4
FF:10153-102I9 76 years, female 479.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 220.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 174.8
Samples: 4

Max nTPM: 194.9
Min nTPM: 152.8
Sample A Female 194.9
Sample B Female 185.1
Sample C Male 166.3
Sample D Male 152.8
Entorhinal cortex
nTPM: 220.2
Samples: 4

Max nTPM: 259.1
Min nTPM: 194.5
Sample A Female 229.8
Sample B Female 194.5
Sample C Male 259.1
Sample D Male 197.2
Subiculum
nTPM: 191.2
Samples: 4

Max nTPM: 220.0
Min nTPM: 173.9
Sample A Female 220.0
Sample B Female 173.9
Sample C Male 190.8
Sample D Male 179.9
Ventral hippocampus
nTPM: 176.5
Samples: 4

Max nTPM: 216.1
Min nTPM: 147.1
Sample A Female 149.5
Sample B Female 147.1
Sample C Male 216.1
Sample D Male 193.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 410.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 410.5
Samples: 4

Max nTPM: 428.6
Min nTPM: 388.8
Sample A Male 388.8
Sample B Male 428.6
Sample C Female 407.7
Sample D Female 417.0
Hippocampal formation
nTPM: 372.0
Samples: 4

Max nTPM: 393.1
Min nTPM: 346.5
Sample A Male 393.1
Sample B Male 346.5
Sample C Female 390.6
Sample D Female 357.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
1052 Antisense, RP_Baylor_103071, Mouse strain C57BL/6J (56 days, male) 12.3
1051 Antisense, RP_Baylor_103071, Mouse strain C57BL/6J (56 days, male) 10.8
1053 Sense, RPS_Baylor_37057, Mouse strain C57BL/6J (56 days, male) 0.0

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