HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:168.6 nTPM
HPA:168.6 nTPM
GTEx:141.3 nTPM
FANTOM5:54.0 Scaled Tags Per Million
Pig:119.7 nTPM
Mouse:228.4 nTPM
Allen mouse:10.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003995Antibody HPA005700Antibody HPA030069Antibody CAB002683
Glial cells LowHighLowNot detected
Neuronal cells MediumHighMediumHigh









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 168.6
Sample id Sample description nTPM
Hippocampus
nTPM: 134.6
2621 Female, age 67, right hemisphere 143.6
2529 Female, age 94, left hemisphere 143.0
1898 Male, age 80, left hemisphere 141.8
1855 Male, age 76, left hemisphere 135.3
2148 Female, age 91, left hemisphere 129.1
1911 Female, age 85, right hemisphere 114.8
Dentate gyrus
nTPM: 134.6
2531 Female, age 67, both hemispheres 158.0
2246 Female, age 85, both hemispheres 145.7
2530 Female, age 94, left hemisphere 135.1
2528 Male, age 74, both hemispheres 130.4
2010 Male, age 76, both hemispheres 122.2
1927 Female, age 91, both hemispheres 116.5
Entorhinal gyrus
nTPM: 128.9
2764 Male, age 80, right hemisphere 154.0
1787 Male, age 76, left hemisphere 138.0
2686 Male, age 75, right hemisphere 129.1
2117 Female, age 91, right hemisphere 118.4
1938 Female, age 85, left hemisphere 118.1
2613 Female, age 94, left hemisphere 115.7
Hippocampus, CA1
nTPM: 137.8
2082 Female, age 91, right hemisphere 150.3
2749 Male, age 80, left hemisphere 146.9
2527 Male, age 74, both hemispheres 136.5
2045 Male, age 76, both hemispheres 128.0
1873 Female, age 85, both hemispheres 127.5
Hippocampus, CA2
nTPM: 142.8
1940 Female, age 85, left hemisphere 187.3
2113 Female, age 91, right hemisphere 149.1
2437 Female, age 94, left hemisphere 137.0
1963 Male, age 80, left hemisphere 134.9
1892 Male, age 76, both hemispheres 128.6
2249 Male, age 74, both hemispheres 120.1
Hippocampus, CA3
nTPM: 136.4
2861 Female, age 67, both hemispheres 159.5
2620 Female, age 94, left hemisphere 152.6
2137 Male, age 80, left hemisphere 144.2
1867 Male, age 76, both hemispheres 122.7
2436 Male, age 74, both hemispheres 120.3
1891 Female, age 85, both hemispheres 119.5
Parahippocampal cortex
nTPM: 142.3
1850 Male, age 80, both hemispheres 154.5
2245 Female, age 91, both hemispheres 150.3
2622 Female, age 67, right hemisphere 150.3
2693 Female, age 94, both hemispheres 149.7
2250 Female, age 67, right hemisphere 144.7
2532 Female, age 72, left hemisphere 144.4
2018 Male, age 76, both hemispheres 143.9
1933 Female, age 85, both hemispheres 143.6
2692 Male, age 74, both hemispheres 127.1
1990 Female, age 91, right hemisphere 114.3
Perirhinal gyrus
nTPM: 168.6
1794 Male, age 80, right hemisphere 183.0
2521 Female, age 94, right hemisphere 178.8
1841 Female, age 85, right hemisphere 169.0
2848 Male, age 76, right hemisphere 158.5
1847 Female, age 91, left hemisphere 153.9
Subiculum
nTPM: 126.8
2619 Male, age 74, both hemispheres 132.2
1977 Female, age 85, both hemispheres 132.1
2438 Female, age 94, left hemisphere 129.5
1901 Male, age 80, both hemispheres 127.2
2729 Female, age 91, right hemisphere 122.7
2042 Male, age 76, both hemispheres 117.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 141.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 141.3
Samples: 197

Max nTPM: 379.6
Min nTPM: 61.5
Std nTPM: 48.0
Median nTPM: 129.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 379.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 282.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 274.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 263.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 259.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 255.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 247.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 243.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 242.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 229.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 227.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.0
FF:10153-102I9 76 years, female 69.4
FF:10169-103B7 60 years, female 38.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 119.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 113.1
Samples: 4

Max nTPM: 147.1
Min nTPM: 66.7
Sample A Female 142.7
Sample B Female 96.0
Sample C Male 147.1
Sample D Male 66.7
Entorhinal cortex
nTPM: 84.7
Samples: 4

Max nTPM: 112.0
Min nTPM: 65.1
Sample A Female 75.8
Sample B Female 86.0
Sample C Male 112.0
Sample D Male 65.1
Subiculum
nTPM: 110.0
Samples: 4

Max nTPM: 123.9
Min nTPM: 93.2
Sample A Female 115.6
Sample B Female 107.2
Sample C Male 123.9
Sample D Male 93.2
Ventral hippocampus
nTPM: 119.7
Samples: 4

Max nTPM: 174.9
Min nTPM: 88.4
Sample A Female 115.1
Sample B Female 88.4
Sample C Male 174.9
Sample D Male 100.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 228.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 228.5
Samples: 4

Max nTPM: 289.7
Min nTPM: 192.5
Sample A Male 201.5
Sample B Male 192.5
Sample C Female 230.1
Sample D Female 289.7
Hippocampal formation
nTPM: 177.1
Samples: 4

Max nTPM: 207.5
Min nTPM: 158.3
Sample A Male 207.5
Sample B Male 165.6
Sample C Female 158.3
Sample D Female 176.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.2
32576 Antisense, RP_040324_01_D11, Mouse strain C57BL/6J (56 days, male) 12.8
71608206 Antisense, RP_050927_01_B02, Mouse strain C57BL/6J (56 days, male) 7.7

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The Human Protein Atlas

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