AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		141.085
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:67.8 nTPM
HPA:67.8 nTPM
GTEx:154.5 nTPM
FANTOM5:65.9 Scaled Tags Per Million
Mouse:84.3 nTPM
Allen mouse:9.9 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA013998
Amygdala mean intensity 141.085
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 78.048
Basal medial amygdaloid nucleus 106.059
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 93.532
Cortical amygdala 97.467
Central amygdala 115.057
Medial amygdaloid nucleus 126.858

AMYGDALA - HPA Brain RNA-seq
Max nTPM 67.8
Sample id Sample description nTPM
Amygdala
nTPM: 38.1
2517 Female, age 94, left hemisphere 52.9
1987 Female, age 91, left hemisphere 42.1
2695 Female, age 67, right hemisphere 39.3
2514 Male, age 75, right hemisphere 29.0
2814 Male, age 76, right hemisphere 27.0
Basal amygdala
nTPM: 67.8
2685 Female, age 94, left hemisphere 81.8
2243 Female, age 91, right hemisphere 76.3
2110 Male, age 80, left hemisphere 71.5
2827 Female, age 67, right hemisphere 68.2
1955 Male, age 76, both hemispheres 56.5
2609 Male, age 75, right hemisphere 52.4
Central amygdala
nTPM: 54.4
2701 Female, age 91, right hemisphere 68.6
2826 Female, age 94, left hemisphere 64.3
2239 Male, age 80, left hemisphere 62.9
2515 Male, age 75, right hemisphere 50.7
1905 Male, age 76, both hemispheres 25.6
Corticomedial amygdala
nTPM: 62.7
2535 Female, age 67, right hemisphere 76.8
2429 Female, age 94, left hemisphere 75.6
2240 Male, age 76, both hemispheres 69.4
2829 Male, age 80, left hemisphere 67.8
2428 Male, age 75, right hemisphere 48.9
2242 Female, age 91, right hemisphere 38.0
Lateral amygdala
nTPM: 50.1
2534 Female, age 94, left hemisphere 72.7
2255 Female, age 91, right hemisphere 56.3
2256 Male, age 80, left hemisphere 45.2
2516 Male, age 75, right hemisphere 44.6
2830 Female, age 67, right hemisphere 41.3
1883 Male, age 76, both hemispheres 40.2
Stria terminalis, bed nucleus
nTPM: 62.9
2201 Male, age 74, unknown 75.3
2486 Female, age 94, both hemispheres 60.8
1974 Female, age 91, both hemispheres 52.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 154.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 154.5
Samples: 152

Max nTPM: 498.7
Min nTPM: 7.6
Std nTPM: 75.5
Median nTPM: 145.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 498.7
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 379.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 313.1
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 310.2
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 305.7
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 288.3
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 288.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 285.8
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 280.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 279.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 267.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 65.9
FF:10151-102I7 76 years, female 65.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 84.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 84.4
Samples: 4

Max nTPM: 92.2
Min nTPM: 74.7
Sample A Male 92.2
Sample B Male 84.2
Sample C Female 74.7
Sample D Female 86.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 9.9
69671905 Antisense, RP_050428_02_F01, Mouse strain C57BL/6J (56 days, male) 11.5
73788010 Antisense, RP_051213_01_A05, Mouse strain C57BL/6J (56 days, male) 8.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.