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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:394.5 nTPM
FANTOM5:78.2 Scaled Tags Per Million
Pig:128.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA064006
Glial cells Medium
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 394.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 394.5
Samples: 246

Max nTPM: 933.4
Min nTPM: 171.4
Std nTPM: 118.4
Median nTPM: 369.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 933.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 883.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 847.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 790.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 777.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 777.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 702.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 700.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 691.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 676.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 674.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 602.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 585.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 585.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 567.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 565.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 562.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 542.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 542.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 539.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 538.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 536.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 533.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 531.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 525.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 524.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 521.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 521.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 519.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 516.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 513.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 506.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 504.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 501.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 495.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 491.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 491.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 491.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 489.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 488.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 486.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 485.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 484.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 483.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 483.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 481.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 480.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 479.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 479.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 476.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 470.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 470.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 469.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 469.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 461.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 460.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 457.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 456.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 455.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 453.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 453.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 453.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 451.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 450.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 450.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 449.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 448.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 446.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 443.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 440.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 438.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 438.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 431.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 430.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 429.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 428.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 428.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 427.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 425.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 425.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 418.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 417.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 414.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 414.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 410.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 410.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 408.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 404.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 403.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 403.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 402.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 402.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 401.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 399.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 398.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 398.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 397.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 396.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 394.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 393.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 392.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 391.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 391.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 388.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 386.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 386.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 385.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 385.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 385.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 384.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 384.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 383.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 383.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 382.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 382.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 381.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 379.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 376.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 374.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 373.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 372.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 371.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 370.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 368.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 368.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 368.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 367.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 366.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 365.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 364.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 364.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 363.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 363.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 362.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 362.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 360.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 360.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 359.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 358.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 357.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 356.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 355.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 355.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 354.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 353.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 352.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 351.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 351.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 350.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 348.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 348.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 347.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 346.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 346.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 345.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 345.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 345.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 345.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 343.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 343.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 343.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 343.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 341.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 340.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 336.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 335.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 335.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 335.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 335.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 332.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 331.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 330.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 330.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 327.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 326.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 326.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 324.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 321.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 320.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 320.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 318.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 317.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 317.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 315.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 314.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 313.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 310.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 310.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 308.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 306.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 305.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 304.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 304.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 302.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 302.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 302.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 301.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 300.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 300.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 298.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 298.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 297.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 297.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 297.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 296.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 296.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 295.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 295.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 294.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 293.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 291.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 289.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 286.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 283.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 282.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 282.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 282.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 280.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 280.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 280.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 279.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 278.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 276.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 274.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 269.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 268.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 267.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 265.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 264.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 262.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 257.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 255.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 254.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 251.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 249.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 243.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 236.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 234.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 233.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 233.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 229.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 228.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 214.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 199.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 185.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 171.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 78.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 78.2
FF:10164-103B2 76 years, female 78.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 128.9
Pig sample Sample description nTPM
Caudate
nTPM: 128.9
Samples: 4

Max nTPM: 155.1
Min nTPM: 106.4
Sample A Female 106.4
Sample B Female 143.8
Sample C Male 155.1
Sample D Male 110.2

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