HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:86.1 nTPM
HPA:86.1 nTPM
GTEx:109.9 nTPM
FANTOM5:196.8 Scaled Tags Per Million
Pig:96.4 nTPM
Mouse:120.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060686Antibody CAB013097
Glial cells LowLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 86.1
Sample id Sample description nTPM
Hippocampus
nTPM: 74.8
1898 Male, age 80, left hemisphere 92.7
2529 Female, age 94, left hemisphere 74.0
1855 Male, age 76, left hemisphere 73.0
1911 Female, age 85, right hemisphere 71.3
2621 Female, age 67, right hemisphere 70.9
2148 Female, age 91, left hemisphere 66.9
Dentate gyrus
nTPM: 77.3
2010 Male, age 76, both hemispheres 84.3
1927 Female, age 91, both hemispheres 82.5
2246 Female, age 85, both hemispheres 80.7
2528 Male, age 74, both hemispheres 76.6
2530 Female, age 94, left hemisphere 73.1
2531 Female, age 67, both hemispheres 66.7
Entorhinal gyrus
nTPM: 70.8
1787 Male, age 76, left hemisphere 79.6
2764 Male, age 80, right hemisphere 77.9
1938 Female, age 85, left hemisphere 77.2
2117 Female, age 91, right hemisphere 68.1
2613 Female, age 94, left hemisphere 61.6
2686 Male, age 75, right hemisphere 60.5
Hippocampus, CA1
nTPM: 81.6
2749 Male, age 80, left hemisphere 100.6
1873 Female, age 85, both hemispheres 82.0
2527 Male, age 74, both hemispheres 81.3
2045 Male, age 76, both hemispheres 75.5
2082 Female, age 91, right hemisphere 68.8
Hippocampus, CA2
nTPM: 80.6
1892 Male, age 76, both hemispheres 91.2
2249 Male, age 74, both hemispheres 89.5
1963 Male, age 80, left hemisphere 83.8
2437 Female, age 94, left hemisphere 75.4
1940 Female, age 85, left hemisphere 72.4
2113 Female, age 91, right hemisphere 71.6
Hippocampus, CA3
nTPM: 75.7
2436 Male, age 74, both hemispheres 88.3
2137 Male, age 80, left hemisphere 87.1
1867 Male, age 76, both hemispheres 79.2
1891 Female, age 85, both hemispheres 72.0
2620 Female, age 94, left hemisphere 67.4
2861 Female, age 67, both hemispheres 60.3
Parahippocampal cortex
nTPM: 74.0
1850 Male, age 80, both hemispheres 87.1
1933 Female, age 85, both hemispheres 79.4
2250 Female, age 67, right hemisphere 78.6
1990 Female, age 91, right hemisphere 78.2
2245 Female, age 91, both hemispheres 77.0
2532 Female, age 72, left hemisphere 75.9
2018 Male, age 76, both hemispheres 75.0
2693 Female, age 94, both hemispheres 70.9
2692 Male, age 74, both hemispheres 59.7
2622 Female, age 67, right hemisphere 58.1
Perirhinal gyrus
nTPM: 86.1
1847 Female, age 91, left hemisphere 100.1
1794 Male, age 80, right hemisphere 91.0
1841 Female, age 85, right hemisphere 85.9
2521 Female, age 94, right hemisphere 78.4
2848 Male, age 76, right hemisphere 74.9
Subiculum
nTPM: 72.1
1977 Female, age 85, both hemispheres 80.5
1901 Male, age 80, both hemispheres 77.4
2438 Female, age 94, left hemisphere 70.2
2619 Male, age 74, both hemispheres 69.2
2729 Female, age 91, right hemisphere 68.8
2042 Male, age 76, both hemispheres 66.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 109.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 109.9
Samples: 197

Max nTPM: 226.2
Min nTPM: 57.9
Std nTPM: 31.5
Median nTPM: 103.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 226.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 193.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 192.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 190.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 186.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 180.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 175.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 173.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 173.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 170.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 170.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 196.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 196.8
FF:10169-103B7 60 years, female 250.0
FF:10153-102I9 76 years, female 143.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 96.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 96.4
Samples: 4

Max nTPM: 126.3
Min nTPM: 66.8
Sample A Female 126.3
Sample B Female 102.6
Sample C Male 89.9
Sample D Male 66.8
Entorhinal cortex
nTPM: 71.0
Samples: 4

Max nTPM: 80.6
Min nTPM: 57.8
Sample A Female 74.4
Sample B Female 80.6
Sample C Male 71.2
Sample D Male 57.8
Subiculum
nTPM: 75.2
Samples: 4

Max nTPM: 90.9
Min nTPM: 67.8
Sample A Female 90.9
Sample B Female 70.3
Sample C Male 67.8
Sample D Male 71.8
Ventral hippocampus
nTPM: 83.8
Samples: 4

Max nTPM: 93.7
Min nTPM: 63.3
Sample A Female 93.2
Sample B Female 63.3
Sample C Male 85.1
Sample D Male 93.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 120.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 120.8
Samples: 4

Max nTPM: 127.3
Min nTPM: 117.7
Sample A Male 118.0
Sample B Male 117.7
Sample C Female 120.0
Sample D Female 127.3
Hippocampal formation
nTPM: 120.7
Samples: 4

Max nTPM: 137.3
Min nTPM: 113.3
Sample A Male 137.3
Sample B Male 115.4
Sample C Female 116.8
Sample D Female 113.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71724017 Antisense, RP_050921_01_D03, Mouse strain C57BL/6J (56 days, male) 0.0

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