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RAB11A
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  • RAB11A
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:87.2 nTPM
HPA:87.2 nTPM
GTEx:115.1 nTPM
FANTOM5:154.3 Scaled Tags Per Million
Pig:103.3 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 87.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 75.2
1981 Female, age 72, midline 91.5
2048 Male, age 55, midline 73.4
2565 Male, age 75, midline 72.4
2816 Male, age 47, midline 69.7
2194 Female, age 79, both hemispheres 68.9
Cervical spinal cord, dorsal horn
nTPM: 87.2
2296 Male, age 66, both hemispheres 98.4
2173 Female, age 72, unknown 97.7
2069 Male, age 47, both hemispheres 94.1
2297 Male, age 75, both hemispheres 85.3
2721 Male, age 90, both hemispheres 74.2
1877 Male, age 55, unknown 73.8
Cervical spinal cord, ventral horn
nTPM: 80.8
2098 Female, age 72, unknown 100.7
2809 Male, age 90, both hemispheres 85.8
2480 Male, age 75, both hemispheres 85.2
2068 Male, age 55, unknown 75.7
2295 Male, age 66, both hemispheres 73.5
2820 Female, age 79, both hemispheres 64.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 115.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 115.1
Samples: 159

Max nTPM: 174.4
Min nTPM: 55.9
Std nTPM: 18.9
Median nTPM: 116.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 174.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 174.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 166.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 161.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 154.2
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 151.1
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 150.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 150.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 147.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 142.5
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 142.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 138.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 138.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 138.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 138.7
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 137.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 136.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 136.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 134.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 133.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 133.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 132.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 132.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 132.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 132.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 131.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 131.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 130.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 129.5
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 128.3
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 128.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 127.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 127.3
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 127.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 127.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 126.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 126.0
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 125.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 125.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 125.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 125.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 124.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 124.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 124.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 123.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 123.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 123.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 122.9
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 122.9
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 122.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 122.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 122.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 121.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 121.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 121.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 121.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 121.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 121.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 121.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 120.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 120.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 120.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 120.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 120.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 119.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 119.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 119.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 119.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 119.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 119.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 119.2
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 119.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 119.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 118.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 118.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 118.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 118.2
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 117.4
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 116.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 116.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 116.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 116.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 115.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 114.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 114.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 113.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 112.9
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 111.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 111.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 111.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 111.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 111.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 111.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 111.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 110.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 110.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 110.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 110.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 110.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 109.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 109.0
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 108.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 108.5
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 108.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 107.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 107.7
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 106.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 106.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 106.6
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 106.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 105.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 105.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 104.9
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 104.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 103.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 103.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 103.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 103.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 102.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 102.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 102.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 102.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 102.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 101.4
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 101.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 100.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 100.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 100.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 99.8
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 99.8
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 99.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 99.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 98.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 97.1
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 96.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 96.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 96.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 95.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 95.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 94.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 94.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 91.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 91.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 90.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 90.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 90.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 90.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 90.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 90.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 87.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 86.6
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 86.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 83.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 82.4
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 81.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 76.3
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 69.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 68.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 55.9
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 154.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 154.3
FF:10159-103A6 76 years, female 157.5
FF:10181-103D1 60 years, female 151.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 103.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 87.7
Samples: 4

Max nTPM: 91.5
Min nTPM: 82.5
Sample A Female 91.5
Sample B Female 90.1
Sample C Male 86.6
Sample D Male 82.5
Ventral spinal cord
nTPM: 103.3
Samples: 4

Max nTPM: 111.0
Min nTPM: 97.0
Sample A Female 104.7
Sample B Female 111.0
Sample C Male 97.0
Sample D Male 100.6

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