HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:254.5 nTPM
HPA:254.5 nTPM
GTEx:218.9 nTPM
FANTOM5:226.3 Scaled Tags Per Million
Pig:86.3 nTPM
Mouse:94.4 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006881
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 254.5
Sample id Sample description nTPM
Hippocampus
nTPM: 196.0
2529 Female, age 94, left hemisphere 258.4
1911 Female, age 85, right hemisphere 214.3
2621 Female, age 67, right hemisphere 207.8
2148 Female, age 91, left hemisphere 170.6
1898 Male, age 80, left hemisphere 170.1
1855 Male, age 76, left hemisphere 154.6
Dentate gyrus
nTPM: 200.9
2530 Female, age 94, left hemisphere 279.1
2010 Male, age 76, both hemispheres 214.9
2531 Female, age 67, both hemispheres 197.1
2246 Female, age 85, both hemispheres 185.3
2528 Male, age 74, both hemispheres 180.9
1927 Female, age 91, both hemispheres 148.0
Entorhinal gyrus
nTPM: 226.7
2764 Male, age 80, right hemisphere 275.5
2117 Female, age 91, right hemisphere 273.8
2686 Male, age 75, right hemisphere 227.3
2613 Female, age 94, left hemisphere 214.8
1938 Female, age 85, left hemisphere 185.7
1787 Male, age 76, left hemisphere 182.9
Hippocampus, CA1
nTPM: 170.1
2082 Female, age 91, right hemisphere 202.9
2527 Male, age 74, both hemispheres 182.8
2045 Male, age 76, both hemispheres 157.9
2749 Male, age 80, left hemisphere 155.7
1873 Female, age 85, both hemispheres 151.2
Hippocampus, CA2
nTPM: 208.4
2437 Female, age 94, left hemisphere 241.8
1963 Male, age 80, left hemisphere 231.4
2249 Male, age 74, both hemispheres 213.3
2113 Female, age 91, right hemisphere 211.5
1940 Female, age 85, left hemisphere 209.3
1892 Male, age 76, both hemispheres 142.8
Hippocampus, CA3
nTPM: 175.2
1891 Female, age 85, both hemispheres 236.4
1867 Male, age 76, both hemispheres 177.8
2861 Female, age 67, both hemispheres 166.5
2436 Male, age 74, both hemispheres 160.3
2620 Female, age 94, left hemisphere 157.9
2137 Male, age 80, left hemisphere 152.3
Parahippocampal cortex
nTPM: 200.2
2532 Female, age 72, left hemisphere 246.7
2018 Male, age 76, both hemispheres 239.1
2692 Male, age 74, both hemispheres 234.0
1990 Female, age 91, right hemisphere 223.4
1850 Male, age 80, both hemispheres 195.4
2245 Female, age 91, both hemispheres 190.5
2622 Female, age 67, right hemisphere 182.7
1933 Female, age 85, both hemispheres 174.1
2693 Female, age 94, both hemispheres 170.1
2250 Female, age 67, right hemisphere 146.0
Perirhinal gyrus
nTPM: 158.9
2848 Male, age 76, right hemisphere 179.4
1794 Male, age 80, right hemisphere 164.5
2521 Female, age 94, right hemisphere 161.3
1847 Female, age 91, left hemisphere 149.2
1841 Female, age 85, right hemisphere 140.0
Subiculum
nTPM: 254.5
2042 Male, age 76, both hemispheres 341.6
2438 Female, age 94, left hemisphere 281.3
1901 Male, age 80, both hemispheres 266.4
1977 Female, age 85, both hemispheres 243.4
2619 Male, age 74, both hemispheres 216.1
2729 Female, age 91, right hemisphere 178.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 218.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 218.9
Samples: 197

Max nTPM: 839.5
Min nTPM: 46.7
Std nTPM: 108.3
Median nTPM: 193.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 839.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 519.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 515.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 515.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 449.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 442.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 441.6
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 441.1
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 422.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 422.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 420.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 226.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 226.3
FF:10153-102I9 76 years, female 313.6
FF:10169-103B7 60 years, female 139.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 86.3
Samples: 4

Max nTPM: 142.4
Min nTPM: 25.9
Sample A Female 142.4
Sample B Female 64.8
Sample C Male 112.1
Sample D Male 25.9
Entorhinal cortex
nTPM: 41.9
Samples: 4

Max nTPM: 47.7
Min nTPM: 34.7
Sample A Female 44.4
Sample B Female 47.7
Sample C Male 40.6
Sample D Male 34.7
Subiculum
nTPM: 49.1
Samples: 4

Max nTPM: 56.6
Min nTPM: 42.9
Sample A Female 56.6
Sample B Female 53.5
Sample C Male 43.5
Sample D Male 42.9
Ventral hippocampus
nTPM: 60.7
Samples: 4

Max nTPM: 73.9
Min nTPM: 37.2
Sample A Female 73.9
Sample B Female 37.2
Sample C Male 68.7
Sample D Male 63.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.8
Samples: 4

Max nTPM: 72.0
Min nTPM: 43.6
Sample A Male 72.0
Sample B Male 55.7
Sample C Female 68.0
Sample D Female 43.6
Hippocampal formation
nTPM: 94.4
Samples: 4

Max nTPM: 113.4
Min nTPM: 80.1
Sample A Male 80.1
Sample B Male 90.6
Sample C Female 113.4
Sample D Female 93.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
70429303 Antisense, RP_050614_01_D08, Mouse strain C57BL/6J (56 days, male) 5.8

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