COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:22.0 nTPM
HPA:22.0 nTPM
GTEx:20.2 nTPM
FANTOM5:61.3 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 22.0
overview
Male, age 54 		Colon sample 67
nTPM: 8.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 19.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 12.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 16.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 38.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 30.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 18
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 17.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 30.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 19
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 21.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 33
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 22.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 20.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 20.2
Samples: 373

Max nTPM: 81.5
Min nTPM: 0.1
Std nTPM: 12.2
Median nTPM: 18.0
GTEX-1JMQJ-2626-SM-CY8HQ 50-59 years, male 81.5
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 79.6
GTEX-1HBPH-2526-SM-ACKXK 40-49 years, female 64.3
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 58.5
GTEX-12696-1926-SM-5EGJT 60-69 years, male 56.7
GTEX-1GMR8-2926-SM-9KNW5 50-59 years, female 55.8
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 55.0
GTEX-1LG7Y-2226-SM-E9U5K 50-59 years, male 54.8
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 54.3
GTEX-13RTJ-1926-SM-5YYA2 60-69 years, male 50.5
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 50.0
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Colon - Transverse
Average nTPM: 19.1
Samples: 406

Max nTPM: 66.0
Min nTPM: 0.3
Std nTPM: 12.4
Median nTPM: 15.3
GTEX-18A7B-2026-SM-72D71 70-79 years, male 66.0
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 64.4
GTEX-144GL-2526-SM-5TDDL 50-59 years, male 62.1
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 62.1
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 59.1
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 58.7
GTEX-1MCC2-1626-SM-DIPEW 30-39 years, female 57.7
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 57.6
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 57.2
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 56.8
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 55.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 61.3
FF:10014-101C5 62,83,84 years, mixed 61.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.